Hb_035398_020

Information

Type -
Description -
Location Contig35398: 1766-6072
Sequence    

Annotation

kegg
ID pop:POPTR_0005s15290g
description hypothetical protein
nr
ID XP_012078010.1
description PREDICTED: alpha/beta hydrolase domain-containing protein 17B [Jatropha curcas]
swissprot
ID Q5ZJ01
description Alpha/beta hydrolase domain-containing protein 17B OS=Gallus gallus GN=ABHD17B PE=2 SV=1
trembl
ID A0A067KMF6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13025 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_035398_020 0.0 - - PREDICTED: alpha/beta hydrolase domain-containing protein 17B [Jatropha curcas]
2 Hb_000757_060 0.0628160705 - - hypothetical protein PRUPE_ppa001141mg [Prunus persica]
3 Hb_000099_080 0.0684850139 - - kinesin light chain, putative [Ricinus communis]
4 Hb_001242_060 0.0767925367 - - PREDICTED: uncharacterized protein LOC105139508 [Populus euphratica]
5 Hb_003126_050 0.0798535537 - - PREDICTED: cell cycle checkpoint protein RAD17 isoform X1 [Jatropha curcas]
6 Hb_000210_180 0.080955826 - - PREDICTED: protein YLS9-like [Jatropha curcas]
7 Hb_001248_060 0.0819451516 - - conserved hypothetical protein [Ricinus communis]
8 Hb_007691_030 0.0819635523 desease resistance Gene Name: AAA PREDICTED: ATPase family AAA domain-containing protein 1-B [Jatropha curcas]
9 Hb_036790_100 0.0820630378 - - PREDICTED: uncharacterized protein LOC105645120 [Jatropha curcas]
10 Hb_001226_040 0.0824296306 - - protein with unknown function [Ricinus communis]
11 Hb_003417_020 0.0828490706 - - PREDICTED: 50S ribosomal protein L13, chloroplastic [Jatropha curcas]
12 Hb_003092_040 0.0835418802 - - PREDICTED: calmodulin-binding receptor-like cytoplasmic kinase 3 isoform X2 [Pyrus x bretschneideri]
13 Hb_000580_180 0.0837396997 - - conserved hypothetical protein [Ricinus communis]
14 Hb_008092_040 0.0840671081 - - PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like [Jatropha curcas]
15 Hb_002835_080 0.0843815617 - - PREDICTED: 50S ribosomal protein L19-1, chloroplastic-like [Jatropha curcas]
16 Hb_001408_040 0.0844976636 - - PREDICTED: MACPF domain-containing protein At4g24290 isoform X2 [Jatropha curcas]
17 Hb_000334_280 0.0845421615 - - PREDICTED: protein FRA10AC1 [Jatropha curcas]
18 Hb_010128_080 0.0849575749 - - PREDICTED: pentatricopeptide repeat-containing protein At1g63330-like isoform X1 [Jatropha curcas]
19 Hb_058999_020 0.0852854228 - - PREDICTED: mitochondrial outer membrane import complex protein METAXIN [Jatropha curcas]
20 Hb_000041_270 0.0854007241 - - PREDICTED: mitochondrial import receptor subunit TOM40-1 [Jatropha curcas]

Gene co-expression network

sample Hb_035398_020 Hb_035398_020 Hb_000757_060 Hb_000757_060 Hb_035398_020--Hb_000757_060 Hb_000099_080 Hb_000099_080 Hb_035398_020--Hb_000099_080 Hb_001242_060 Hb_001242_060 Hb_035398_020--Hb_001242_060 Hb_003126_050 Hb_003126_050 Hb_035398_020--Hb_003126_050 Hb_000210_180 Hb_000210_180 Hb_035398_020--Hb_000210_180 Hb_001248_060 Hb_001248_060 Hb_035398_020--Hb_001248_060 Hb_058999_020 Hb_058999_020 Hb_000757_060--Hb_058999_020 Hb_000757_060--Hb_001242_060 Hb_000538_270 Hb_000538_270 Hb_000757_060--Hb_000538_270 Hb_002499_040 Hb_002499_040 Hb_000757_060--Hb_002499_040 Hb_000317_240 Hb_000317_240 Hb_000757_060--Hb_000317_240 Hb_000757_060--Hb_001248_060 Hb_010128_080 Hb_010128_080 Hb_000099_080--Hb_010128_080 Hb_007691_030 Hb_007691_030 Hb_000099_080--Hb_007691_030 Hb_010712_030 Hb_010712_030 Hb_000099_080--Hb_010712_030 Hb_031527_040 Hb_031527_040 Hb_000099_080--Hb_031527_040 Hb_000395_190 Hb_000395_190 Hb_000099_080--Hb_000395_190 Hb_000563_320 Hb_000563_320 Hb_000099_080--Hb_000563_320 Hb_001242_060--Hb_031527_040 Hb_000016_250 Hb_000016_250 Hb_001242_060--Hb_000016_250 Hb_000030_300 Hb_000030_300 Hb_001242_060--Hb_000030_300 Hb_001242_060--Hb_000563_320 Hb_005779_060 Hb_005779_060 Hb_001242_060--Hb_005779_060 Hb_003417_020 Hb_003417_020 Hb_003126_050--Hb_003417_020 Hb_000640_240 Hb_000640_240 Hb_003126_050--Hb_000640_240 Hb_003092_040 Hb_003092_040 Hb_003126_050--Hb_003092_040 Hb_000041_270 Hb_000041_270 Hb_003126_050--Hb_000041_270 Hb_096563_010 Hb_096563_010 Hb_003126_050--Hb_096563_010 Hb_003126_050--Hb_007691_030 Hb_000210_180--Hb_000041_270 Hb_000210_180--Hb_096563_010 Hb_018838_030 Hb_018838_030 Hb_000210_180--Hb_018838_030 Hb_000656_400 Hb_000656_400 Hb_000210_180--Hb_000656_400 Hb_006332_020 Hb_006332_020 Hb_000210_180--Hb_006332_020 Hb_000210_180--Hb_001242_060 Hb_010618_010 Hb_010618_010 Hb_001248_060--Hb_010618_010 Hb_001409_020 Hb_001409_020 Hb_001248_060--Hb_001409_020 Hb_011995_010 Hb_011995_010 Hb_001248_060--Hb_011995_010 Hb_000289_060 Hb_000289_060 Hb_001248_060--Hb_000289_060 Hb_015934_040 Hb_015934_040 Hb_001248_060--Hb_015934_040 Hb_001408_040 Hb_001408_040 Hb_001248_060--Hb_001408_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
12.7947 7.65406 4.74253 8.28007 7.50262 9.84633
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
7.67017 13.1224 10.0644 8.17045 4.68937

CAGE analysis