Hb_035583_010

Information

Type -
Description -
Location Contig35583: 3-900
Sequence    

Annotation

kegg
ID sly:101257521
description premnaspirodiene oxygenase-like
nr
ID XP_012085920.1
description PREDICTED: premnaspirodiene oxygenase-like [Jatropha curcas]
swissprot
ID A6YIH8
description Premnaspirodiene oxygenase OS=Hyoscyamus muticus GN=CYP71D55 PE=1 SV=1
trembl
ID A0A067K3C6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22279 PE=3 SV=1
Gene Ontology
ID GO:0016020
description premnaspirodiene oxygenase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_36804: 129-1004
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_035583_010 0.0 - - PREDICTED: premnaspirodiene oxygenase-like [Jatropha curcas]
2 Hb_000297_180 0.1020816128 - - Desacetoxyvindoline 4-hydroxylase, putative [Ricinus communis]
3 Hb_004316_130 0.1104131374 - - PREDICTED: glutathione transferase GST 23-like, partial [Eucalyptus grandis]
4 Hb_012532_020 0.113109735 - - Isoflavone reductase, putative [Ricinus communis]
5 Hb_003392_030 0.1187194255 - - conserved hypothetical protein [Ricinus communis]
6 Hb_148435_010 0.1206194354 - - glutathione s-transferase, putative [Ricinus communis]
7 Hb_000487_150 0.1218489056 - - PREDICTED: feruloyl CoA ortho-hydroxylase 2-like [Jatropha curcas]
8 Hb_144783_010 0.1248807245 - - glutathione s-transferase, putative [Ricinus communis]
9 Hb_002966_030 0.1257177437 - - conserved hypothetical protein [Ricinus communis]
10 Hb_007320_040 0.13052297 - - PREDICTED: U-box domain-containing protein 26-like [Jatropha curcas]
11 Hb_000200_180 0.1324690195 - - -
12 Hb_002747_010 0.1341258053 - - PREDICTED: alcohol dehydrogenase-like 1 [Jatropha curcas]
13 Hb_050898_020 0.1350308439 - - hypothetical protein JCGZ_19965 [Jatropha curcas]
14 Hb_124625_010 0.1417707124 - - hypothetical protein JCGZ_01142 [Jatropha curcas]
15 Hb_177880_010 0.1426975052 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Jatropha curcas]
16 Hb_033363_080 0.1430302026 - - Allene oxide cyclase 3, chloroplast precursor, putative [Ricinus communis]
17 Hb_153457_010 0.1439991858 - - Miraculin precursor, putative [Ricinus communis]
18 Hb_002521_010 0.1464599021 - - cinnamate 4-hydroxylase, putative [Ricinus communis]
19 Hb_000059_100 0.1465930598 - - Basic blue protein, putative [Ricinus communis]
20 Hb_124247_030 0.1482830969 rubber biosynthesis Gene Name: 1-deoxy-D-xylulose-5-phosphate synthase PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic [Jatropha curcas]

Gene co-expression network

sample Hb_035583_010 Hb_035583_010 Hb_000297_180 Hb_000297_180 Hb_035583_010--Hb_000297_180 Hb_004316_130 Hb_004316_130 Hb_035583_010--Hb_004316_130 Hb_012532_020 Hb_012532_020 Hb_035583_010--Hb_012532_020 Hb_003392_030 Hb_003392_030 Hb_035583_010--Hb_003392_030 Hb_148435_010 Hb_148435_010 Hb_035583_010--Hb_148435_010 Hb_000487_150 Hb_000487_150 Hb_035583_010--Hb_000487_150 Hb_003893_100 Hb_003893_100 Hb_000297_180--Hb_003893_100 Hb_000297_180--Hb_004316_130 Hb_012368_080 Hb_012368_080 Hb_000297_180--Hb_012368_080 Hb_144783_010 Hb_144783_010 Hb_000297_180--Hb_144783_010 Hb_002475_070 Hb_002475_070 Hb_000297_180--Hb_002475_070 Hb_004316_130--Hb_003893_100 Hb_004316_130--Hb_144783_010 Hb_000797_030 Hb_000797_030 Hb_004316_130--Hb_000797_030 Hb_003097_200 Hb_003097_200 Hb_004316_130--Hb_003097_200 Hb_004316_130--Hb_002475_070 Hb_000127_250 Hb_000127_250 Hb_012532_020--Hb_000127_250 Hb_000059_100 Hb_000059_100 Hb_012532_020--Hb_000059_100 Hb_012532_020--Hb_000487_150 Hb_007320_040 Hb_007320_040 Hb_012532_020--Hb_007320_040 Hb_185391_010 Hb_185391_010 Hb_012532_020--Hb_185391_010 Hb_177880_010 Hb_177880_010 Hb_012532_020--Hb_177880_010 Hb_026650_010 Hb_026650_010 Hb_003392_030--Hb_026650_010 Hb_032621_010 Hb_032621_010 Hb_003392_030--Hb_032621_010 Hb_001936_030 Hb_001936_030 Hb_003392_030--Hb_001936_030 Hb_003166_020 Hb_003166_020 Hb_003392_030--Hb_003166_020 Hb_050898_020 Hb_050898_020 Hb_003392_030--Hb_050898_020 Hb_004195_240 Hb_004195_240 Hb_148435_010--Hb_004195_240 Hb_000347_550 Hb_000347_550 Hb_148435_010--Hb_000347_550 Hb_061195_010 Hb_061195_010 Hb_148435_010--Hb_061195_010 Hb_000748_070 Hb_000748_070 Hb_148435_010--Hb_000748_070 Hb_005000_040 Hb_005000_040 Hb_148435_010--Hb_005000_040 Hb_000318_440 Hb_000318_440 Hb_000487_150--Hb_000318_440 Hb_000487_150--Hb_000127_250 Hb_002173_080 Hb_002173_080 Hb_000487_150--Hb_002173_080 Hb_000487_150--Hb_000059_100 Hb_039562_010 Hb_039562_010 Hb_000487_150--Hb_039562_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.029569 2.03966 3.68818 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 28.0461 0.957214

CAGE analysis