Hb_035662_010

Information

Type -
Description -
Location Contig35662: 635-4162
Sequence    

Annotation

kegg
ID rcu:RCOM_1318880
description hypothetical protein
nr
ID XP_002529273.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9STF4
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1318880 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_035662_010 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_000928_150 0.1852505734 - - conserved hypothetical protein [Ricinus communis]
3 Hb_001677_050 0.2187562173 desease resistance Gene Name: NB-ARC Disease resistance protein RPP8, putative [Ricinus communis]
4 Hb_000056_230 0.2391749444 transcription factor TF Family: TCP hypothetical protein JCGZ_15588 [Jatropha curcas]
5 Hb_114984_010 0.2471233466 - - conserved hypothetical protein [Ricinus communis]
6 Hb_001632_010 0.2568099676 - - hypothetical protein JCGZ_05865 [Jatropha curcas]
7 Hb_010531_050 0.2574559819 - - PREDICTED: uncharacterized protein LOC105632300 isoform X1 [Jatropha curcas]
8 Hb_003995_010 0.2635400703 - - -
9 Hb_009780_090 0.2645199241 - - PREDICTED: pentatricopeptide repeat-containing protein At1g66345, mitochondrial [Jatropha curcas]
10 Hb_000997_410 0.2661139918 - - PREDICTED: uncharacterized protein LOC105632066 [Jatropha curcas]
11 Hb_020499_010 0.2671251416 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
12 Hb_000270_210 0.2679923744 - - PREDICTED: transcription initiation factor IIB-2-like [Jatropha curcas]
13 Hb_001584_180 0.2686215378 - - Photosystem II reaction center PsbP family protein isoform 1 [Theobroma cacao]
14 Hb_128376_010 0.2699724219 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
15 Hb_088542_010 0.2705412668 - - hypothetical protein JCGZ_05865 [Jatropha curcas]
16 Hb_004007_150 0.2738175709 transcription factor TF Family: TAZ PREDICTED: BTB/POZ and TAZ domain-containing protein 4 [Jatropha curcas]
17 Hb_000559_050 0.2741015059 - - hypothetical protein JCGZ_20429 [Jatropha curcas]
18 Hb_001633_100 0.2752169896 - - PREDICTED: protein NETWORKED 3A-like [Jatropha curcas]
19 Hb_003388_050 0.2755093765 - - -
20 Hb_002232_150 0.2755194733 - - PREDICTED: squalene monooxygenase-like [Jatropha curcas]

Gene co-expression network

sample Hb_035662_010 Hb_035662_010 Hb_000928_150 Hb_000928_150 Hb_035662_010--Hb_000928_150 Hb_001677_050 Hb_001677_050 Hb_035662_010--Hb_001677_050 Hb_000056_230 Hb_000056_230 Hb_035662_010--Hb_000056_230 Hb_114984_010 Hb_114984_010 Hb_035662_010--Hb_114984_010 Hb_001632_010 Hb_001632_010 Hb_035662_010--Hb_001632_010 Hb_010531_050 Hb_010531_050 Hb_035662_010--Hb_010531_050 Hb_003311_050 Hb_003311_050 Hb_000928_150--Hb_003311_050 Hb_009780_090 Hb_009780_090 Hb_000928_150--Hb_009780_090 Hb_128376_010 Hb_128376_010 Hb_000928_150--Hb_128376_010 Hb_012423_010 Hb_012423_010 Hb_000928_150--Hb_012423_010 Hb_006269_040 Hb_006269_040 Hb_000928_150--Hb_006269_040 Hb_001677_050--Hb_001632_010 Hb_088542_010 Hb_088542_010 Hb_001677_050--Hb_088542_010 Hb_004007_150 Hb_004007_150 Hb_001677_050--Hb_004007_150 Hb_000605_010 Hb_000605_010 Hb_001677_050--Hb_000605_010 Hb_001138_010 Hb_001138_010 Hb_001677_050--Hb_001138_010 Hb_073212_010 Hb_073212_010 Hb_001677_050--Hb_073212_010 Hb_128496_010 Hb_128496_010 Hb_000056_230--Hb_128496_010 Hb_000329_420 Hb_000329_420 Hb_000056_230--Hb_000329_420 Hb_004218_070 Hb_004218_070 Hb_000056_230--Hb_004218_070 Hb_099046_010 Hb_099046_010 Hb_000056_230--Hb_099046_010 Hb_004662_010 Hb_004662_010 Hb_000056_230--Hb_004662_010 Hb_008406_140 Hb_008406_140 Hb_000056_230--Hb_008406_140 Hb_004920_060 Hb_004920_060 Hb_114984_010--Hb_004920_060 Hb_001731_020 Hb_001731_020 Hb_114984_010--Hb_001731_020 Hb_000997_410 Hb_000997_410 Hb_114984_010--Hb_000997_410 Hb_001489_070 Hb_001489_070 Hb_114984_010--Hb_001489_070 Hb_000116_460 Hb_000116_460 Hb_114984_010--Hb_000116_460 Hb_000021_020 Hb_000021_020 Hb_114984_010--Hb_000021_020 Hb_001632_010--Hb_088542_010 Hb_001632_010--Hb_073212_010 Hb_129067_010 Hb_129067_010 Hb_001632_010--Hb_129067_010 Hb_001632_010--Hb_000605_010 Hb_012384_050 Hb_012384_050 Hb_001632_010--Hb_012384_050 Hb_010531_050--Hb_000997_410 Hb_001622_010 Hb_001622_010 Hb_010531_050--Hb_001622_010 Hb_031527_070 Hb_031527_070 Hb_010531_050--Hb_031527_070 Hb_010531_050--Hb_114984_010 Hb_000984_250 Hb_000984_250 Hb_010531_050--Hb_000984_250 Hb_005464_030 Hb_005464_030 Hb_010531_050--Hb_005464_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0790261 0.017511 0.00753551 0.0221716 0.04637 0.0421667
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0172319 0 0.0274155 0

CAGE analysis