Hb_035687_010

Information

Type -
Description -
Location Contig35687: 13-816
Sequence    

Annotation

kegg
ID osa:9268620
description Os10g0357350
nr
ID WP_042918419.1
description MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
swissprot
ID -
description -
trembl
ID C7J7N6
description Os10g0357350 protein OS=Oryza sativa subsp. japonica GN=Os10g0357350 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_035687_010 0.0 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
2 Hb_001221_370 0.2017397972 - - hypothetical protein MIMGU_mgv1a020064mg, partial [Erythranthe guttata]
3 Hb_004212_040 0.2802401142 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
4 Hb_000205_340 0.2876166511 - - PREDICTED: putative B3 domain-containing protein At2g27410 [Jatropha curcas]
5 Hb_002571_090 0.2909523406 - - -
6 Hb_003206_080 0.29405008 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein HAT22-like [Jatropha curcas]
7 Hb_143874_010 0.2944398603 - - PREDICTED: uncharacterized protein LOC105794100 [Gossypium raimondii]
8 Hb_170156_010 0.2997358415 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
9 Hb_000940_190 0.304478559 - - PREDICTED: uncharacterized protein LOC104878039 [Vitis vinifera]
10 Hb_099723_010 0.3049675542 - - hypothetical protein JCGZ_15340 [Jatropha curcas]
11 Hb_032531_010 0.3076254907 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
12 Hb_065943_010 0.3076450494 - - -
13 Hb_006157_050 0.3098828722 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
14 Hb_001817_030 0.3169173776 - - PREDICTED: putative CCR4-associated factor 1 homolog 8 [Jatropha curcas]
15 Hb_076795_010 0.3176283136 - - hypothetical protein POPTR_0001s07680g, partial [Populus trichocarpa]
16 Hb_046054_010 0.3197984428 - - PREDICTED: uncharacterized protein LOC105650390, partial [Jatropha curcas]
17 Hb_001987_010 0.3225700427 - - -
18 Hb_000065_050 0.3235052807 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
19 Hb_000504_130 0.3242962987 - - GPI transamidase component family protein [Populus trichocarpa]
20 Hb_003349_100 0.3258839995 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_035687_010 Hb_035687_010 Hb_001221_370 Hb_001221_370 Hb_035687_010--Hb_001221_370 Hb_004212_040 Hb_004212_040 Hb_035687_010--Hb_004212_040 Hb_000205_340 Hb_000205_340 Hb_035687_010--Hb_000205_340 Hb_002571_090 Hb_002571_090 Hb_035687_010--Hb_002571_090 Hb_003206_080 Hb_003206_080 Hb_035687_010--Hb_003206_080 Hb_143874_010 Hb_143874_010 Hb_035687_010--Hb_143874_010 Hb_000904_100 Hb_000904_100 Hb_001221_370--Hb_000904_100 Hb_001462_020 Hb_001462_020 Hb_001221_370--Hb_001462_020 Hb_071586_010 Hb_071586_010 Hb_001221_370--Hb_071586_010 Hb_096671_010 Hb_096671_010 Hb_001221_370--Hb_096671_010 Hb_187513_010 Hb_187513_010 Hb_001221_370--Hb_187513_010 Hb_032531_010 Hb_032531_010 Hb_004212_040--Hb_032531_010 Hb_050334_010 Hb_050334_010 Hb_004212_040--Hb_050334_010 Hb_000940_190 Hb_000940_190 Hb_004212_040--Hb_000940_190 Hb_099723_010 Hb_099723_010 Hb_004212_040--Hb_099723_010 Hb_065943_010 Hb_065943_010 Hb_004212_040--Hb_065943_010 Hb_006157_050 Hb_006157_050 Hb_004212_040--Hb_006157_050 Hb_001987_010 Hb_001987_010 Hb_000205_340--Hb_001987_010 Hb_003551_030 Hb_003551_030 Hb_000205_340--Hb_003551_030 Hb_000205_340--Hb_002571_090 Hb_000296_060 Hb_000296_060 Hb_000205_340--Hb_000296_060 Hb_012424_010 Hb_012424_010 Hb_000205_340--Hb_012424_010 Hb_001693_040 Hb_001693_040 Hb_000205_340--Hb_001693_040 Hb_002571_090--Hb_000296_060 Hb_000065_050 Hb_000065_050 Hb_002571_090--Hb_000065_050 Hb_000574_550 Hb_000574_550 Hb_002571_090--Hb_000574_550 Hb_002571_090--Hb_187513_010 Hb_002571_090--Hb_003551_030 Hb_003349_100 Hb_003349_100 Hb_003206_080--Hb_003349_100 Hb_005896_010 Hb_005896_010 Hb_003206_080--Hb_005896_010 Hb_003097_050 Hb_003097_050 Hb_003206_080--Hb_003097_050 Hb_038044_020 Hb_038044_020 Hb_003206_080--Hb_038044_020 Hb_003206_080--Hb_001221_370 Hb_143874_010--Hb_001987_010 Hb_143874_010--Hb_000205_340 Hb_143874_010--Hb_003551_030 Hb_143874_010--Hb_000296_060 Hb_000172_130 Hb_000172_130 Hb_143874_010--Hb_000172_130 Hb_143874_010--Hb_001693_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0319711 0 0 0.0296416 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.20595 0.0464302 0.11422

CAGE analysis