Hb_035761_010

Information

Type -
Description -
Location Contig35761: 345-1133
Sequence    

Annotation

kegg
ID pop:POPTR_0013s02830g
description hypothetical protein
nr
ID KDO64062.1
description hypothetical protein CISIN_1g022501mg [Citrus sinensis]
swissprot
ID -
description -
trembl
ID A0A067FKT2
description Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022501mg PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_035761_010 0.0 - - hypothetical protein CISIN_1g022501mg [Citrus sinensis]
2 Hb_000099_190 0.1334872869 - - PREDICTED: putative cell division cycle ATPase [Jatropha curcas]
3 Hb_000732_240 0.1566272923 - - PREDICTED: dynein light chain 1, cytoplasmic-like [Jatropha curcas]
4 Hb_187021_010 0.1725793152 - - hypothetical protein JCGZ_26658 [Jatropha curcas]
5 Hb_101370_010 0.1850998342 - - hypothetical protein JCGZ_26658 [Jatropha curcas]
6 Hb_154538_010 0.1854387162 - - -
7 Hb_048944_020 0.2003594967 - - hypothetical protein POPTR_0014s002002g, partial [Populus trichocarpa]
8 Hb_001103_070 0.2035804232 - - Patellin-3, putative [Ricinus communis]
9 Hb_000438_150 0.2073016674 transcription factor TF Family: HMG PREDICTED: high mobility group B protein 7 [Jatropha curcas]
10 Hb_009476_150 0.2099779094 transcription factor TF Family: MYB PREDICTED: transcriptional activator Myb-like [Jatropha curcas]
11 Hb_003906_030 0.2110497334 - - mads box protein, putative [Ricinus communis]
12 Hb_049915_010 0.2154067225 - - PREDICTED: uncharacterized serine-rich protein C215.13 [Jatropha curcas]
13 Hb_000342_140 0.2159704667 - - PREDICTED: vacuolar-processing enzyme-like [Jatropha curcas]
14 Hb_008092_030 0.2185269349 transcription factor TF Family: AUX/IAA Auxin-responsive protein IAA27, putative [Ricinus communis]
15 Hb_008643_020 0.2192069283 - - Cf-4/9 disease resistance-like family protein [Populus trichocarpa]
16 Hb_070541_030 0.2196252947 - - -
17 Hb_000172_230 0.2232331126 - - myo-inositol-1 phosphate synthase [Hevea brasiliensis]
18 Hb_001178_040 0.2249664492 desease resistance Gene Name: ABC_trans_N PREDICTED: ABC transporter G family member 34-like [Jatropha curcas]
19 Hb_000936_040 0.2253146871 - - hypothetical protein JCGZ_00046 [Jatropha curcas]
20 Hb_000914_050 0.2255544065 - - PREDICTED: serine/threonine-protein kinase UCNL [Jatropha curcas]

Gene co-expression network

sample Hb_035761_010 Hb_035761_010 Hb_000099_190 Hb_000099_190 Hb_035761_010--Hb_000099_190 Hb_000732_240 Hb_000732_240 Hb_035761_010--Hb_000732_240 Hb_187021_010 Hb_187021_010 Hb_035761_010--Hb_187021_010 Hb_101370_010 Hb_101370_010 Hb_035761_010--Hb_101370_010 Hb_154538_010 Hb_154538_010 Hb_035761_010--Hb_154538_010 Hb_048944_020 Hb_048944_020 Hb_035761_010--Hb_048944_020 Hb_000099_190--Hb_000732_240 Hb_049915_010 Hb_049915_010 Hb_000099_190--Hb_049915_010 Hb_000438_150 Hb_000438_150 Hb_000099_190--Hb_000438_150 Hb_000914_050 Hb_000914_050 Hb_000099_190--Hb_000914_050 Hb_001103_070 Hb_001103_070 Hb_000099_190--Hb_001103_070 Hb_000732_240--Hb_101370_010 Hb_000732_240--Hb_049915_010 Hb_017159_010 Hb_017159_010 Hb_000732_240--Hb_017159_010 Hb_001357_280 Hb_001357_280 Hb_000732_240--Hb_001357_280 Hb_083493_010 Hb_083493_010 Hb_187021_010--Hb_083493_010 Hb_000422_130 Hb_000422_130 Hb_187021_010--Hb_000422_130 Hb_001688_070 Hb_001688_070 Hb_187021_010--Hb_001688_070 Hb_187021_010--Hb_000099_190 Hb_005016_020 Hb_005016_020 Hb_187021_010--Hb_005016_020 Hb_005056_100 Hb_005056_100 Hb_101370_010--Hb_005056_100 Hb_007951_090 Hb_007951_090 Hb_101370_010--Hb_007951_090 Hb_000172_230 Hb_000172_230 Hb_101370_010--Hb_000172_230 Hb_101370_010--Hb_048944_020 Hb_158349_010 Hb_158349_010 Hb_101370_010--Hb_158349_010 Hb_145317_010 Hb_145317_010 Hb_154538_010--Hb_145317_010 Hb_154538_010--Hb_017159_010 Hb_001178_040 Hb_001178_040 Hb_154538_010--Hb_001178_040 Hb_000342_140 Hb_000342_140 Hb_154538_010--Hb_000342_140 Hb_001754_060 Hb_001754_060 Hb_154538_010--Hb_001754_060 Hb_040747_010 Hb_040747_010 Hb_154538_010--Hb_040747_010 Hb_048944_020--Hb_000438_150 Hb_048944_020--Hb_005056_100 Hb_048944_020--Hb_000099_190 Hb_000189_070 Hb_000189_070 Hb_048944_020--Hb_000189_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.45307 5.71288 1.97017 9.03901 0.468042 2.16063
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.195288 0.525306 0.325038

CAGE analysis