Hb_035995_010

Information

Type -
Description -
Location Contig35995: 124-937
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_035995_010 0.0 - - -
2 Hb_004558_060 0.1084381757 transcription factor TF Family: HSF PREDICTED: heat stress transcription factor B-4 [Jatropha curcas]
3 Hb_001663_060 0.1155647752 - - ribonuclease t2, putative [Ricinus communis]
4 Hb_154038_040 0.1171476305 - - nutrient reservoir, putative [Ricinus communis]
5 Hb_002518_020 0.1213533576 - - PREDICTED: uncharacterized protein LOC105631164 [Jatropha curcas]
6 Hb_001369_190 0.1216640225 - - PREDICTED: leucine-rich repeat receptor-like protein kinase TDR [Jatropha curcas]
7 Hb_000645_160 0.1236247639 - - protein translocase, putative [Ricinus communis]
8 Hb_002171_020 0.1265616111 - - protein phosphatase 2a, regulatory subunit, putative [Ricinus communis]
9 Hb_000679_250 0.1273218005 - - PREDICTED: uncharacterized protein LOC105637632 isoform X1 [Jatropha curcas]
10 Hb_001117_180 0.1275404877 - - PREDICTED: uncharacterized protein LOC105629703 isoform X1 [Jatropha curcas]
11 Hb_000849_030 0.1286930734 - - PREDICTED: fimbrin-2 [Jatropha curcas]
12 Hb_034507_090 0.130532536 - - PREDICTED: UPF0503 protein At3g09070, chloroplastic [Jatropha curcas]
13 Hb_000742_130 0.1323409279 - - PREDICTED: probable receptor-like protein kinase At1g30570 [Jatropha curcas]
14 Hb_007659_050 0.1330105847 - - PREDICTED: xylogen-like protein 11 [Jatropha curcas]
15 Hb_122951_010 0.1347197154 - - PREDICTED: uncharacterized protein LOC105639235 [Jatropha curcas]
16 Hb_000005_360 0.1353880648 - - conserved hypothetical protein [Ricinus communis]
17 Hb_000028_550 0.1378233081 - - unknown [Medicago truncatula]
18 Hb_000418_120 0.1382824261 - - PREDICTED: glucan endo-1,3-beta-glucosidase [Jatropha curcas]
19 Hb_001318_100 0.1388554233 - - s-adenosylmethionine synthetase, putative [Ricinus communis]
20 Hb_178049_010 0.138961083 - - PREDICTED: plasma membrane ATPase 2-like isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_035995_010 Hb_035995_010 Hb_004558_060 Hb_004558_060 Hb_035995_010--Hb_004558_060 Hb_001663_060 Hb_001663_060 Hb_035995_010--Hb_001663_060 Hb_154038_040 Hb_154038_040 Hb_035995_010--Hb_154038_040 Hb_002518_020 Hb_002518_020 Hb_035995_010--Hb_002518_020 Hb_001369_190 Hb_001369_190 Hb_035995_010--Hb_001369_190 Hb_000645_160 Hb_000645_160 Hb_035995_010--Hb_000645_160 Hb_004558_060--Hb_001369_190 Hb_009736_020 Hb_009736_020 Hb_004558_060--Hb_009736_020 Hb_002171_020 Hb_002171_020 Hb_004558_060--Hb_002171_020 Hb_005648_020 Hb_005648_020 Hb_004558_060--Hb_005648_020 Hb_004558_060--Hb_002518_020 Hb_002918_270 Hb_002918_270 Hb_004558_060--Hb_002918_270 Hb_000020_200 Hb_000020_200 Hb_001663_060--Hb_000020_200 Hb_001079_050 Hb_001079_050 Hb_001663_060--Hb_001079_050 Hb_000011_280 Hb_000011_280 Hb_001663_060--Hb_000011_280 Hb_003607_080 Hb_003607_080 Hb_001663_060--Hb_003607_080 Hb_003466_010 Hb_003466_010 Hb_001663_060--Hb_003466_010 Hb_001663_060--Hb_005648_020 Hb_001117_180 Hb_001117_180 Hb_154038_040--Hb_001117_180 Hb_000028_550 Hb_000028_550 Hb_154038_040--Hb_000028_550 Hb_000384_020 Hb_000384_020 Hb_154038_040--Hb_000384_020 Hb_001688_030 Hb_001688_030 Hb_154038_040--Hb_001688_030 Hb_154038_040--Hb_004558_060 Hb_154038_040--Hb_002518_020 Hb_005000_280 Hb_005000_280 Hb_002518_020--Hb_005000_280 Hb_001769_070 Hb_001769_070 Hb_002518_020--Hb_001769_070 Hb_000076_280 Hb_000076_280 Hb_002518_020--Hb_000076_280 Hb_002518_020--Hb_002171_020 Hb_000329_010 Hb_000329_010 Hb_002518_020--Hb_000329_010 Hb_006088_020 Hb_006088_020 Hb_001369_190--Hb_006088_020 Hb_001369_190--Hb_002918_270 Hb_001369_190--Hb_003607_080 Hb_005215_050 Hb_005215_050 Hb_001369_190--Hb_005215_050 Hb_000849_030 Hb_000849_030 Hb_001369_190--Hb_000849_030 Hb_000742_130 Hb_000742_130 Hb_000645_160--Hb_000742_130 Hb_032920_030 Hb_032920_030 Hb_000645_160--Hb_032920_030 Hb_001936_180 Hb_001936_180 Hb_000645_160--Hb_001936_180 Hb_000098_260 Hb_000098_260 Hb_000645_160--Hb_000098_260 Hb_001138_070 Hb_001138_070 Hb_000645_160--Hb_001138_070 Hb_149055_010 Hb_149055_010 Hb_000645_160--Hb_149055_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.414963 3.53281 5.32473 15.0509 0 0.204729
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.30069 0.0787728 0 2.06687 4.57697

CAGE analysis