Hb_036069_020

Information

Type -
Description -
Location Contig36069: 444-2720
Sequence    

Annotation

kegg
ID sly:101252632
description probable LRR receptor-like serine/threonine-protein kinase At4g37250
nr
ID XP_012075793.1
description PREDICTED: receptor protein kinase-like protein At4g34220 [Jatropha curcas]
swissprot
ID C0LGS3
description Probable LRR receptor-like serine/threonine-protein kinase At4g37250 OS=Arabidopsis thaliana GN=At4g37250 PE=2 SV=1
trembl
ID A0A067LBN5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15451 PE=4 SV=1
Gene Ontology
ID GO:0004672
description receptor protein kinase-like protein at4g34220

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_036069_020 0.0 - - PREDICTED: receptor protein kinase-like protein At4g34220 [Jatropha curcas]
2 Hb_000911_050 0.0911396832 - - PREDICTED: CBL-interacting serine/threonine-protein kinase 21 [Jatropha curcas]
3 Hb_130563_010 0.0966624397 - - PREDICTED: ABC transporter C family member 3-like isoform X1 [Jatropha curcas]
4 Hb_001758_120 0.1203169284 - - unnamed protein product [Vitis vinifera]
5 Hb_001377_010 0.121069845 - - PREDICTED: transcription factor TRY-like [Jatropha curcas]
6 Hb_000207_340 0.1238298518 transcription factor TF Family: GRAS hypothetical protein POPTR_0013s11930g [Populus trichocarpa]
7 Hb_000797_030 0.1250633294 - - PREDICTED: leucoanthocyanidin dioxygenase [Jatropha curcas]
8 Hb_001218_070 0.1291732845 - - PREDICTED: sugar transport protein 5-like isoform X1 [Jatropha curcas]
9 Hb_001136_030 0.1311424609 - - PREDICTED: mediator of RNA polymerase II transcription subunit 25-like [Jatropha curcas]
10 Hb_003097_200 0.1322285538 - - conserved hypothetical protein [Ricinus communis]
11 Hb_004223_180 0.1350156515 - - PREDICTED: auxin-induced protein 15A [Jatropha curcas]
12 Hb_031931_030 0.1372364722 - - lipid binding protein, putative [Ricinus communis]
13 Hb_008226_020 0.1422105675 - - hypothetical protein JCGZ_03321 [Jatropha curcas]
14 Hb_001545_270 0.1442159659 - - laccase, putative [Ricinus communis]
15 Hb_002870_010 0.1442498008 - - PREDICTED: uncharacterized protein LOC105649339 [Jatropha curcas]
16 Hb_029769_010 0.1442610615 - - PREDICTED: putative disease resistance protein RGA3 isoform X3 [Populus euphratica]
17 Hb_109673_010 0.1475961257 - - glutathione s-transferase, putative [Ricinus communis]
18 Hb_159015_010 0.1476510427 - - receptor protein kinase, putative [Ricinus communis]
19 Hb_000653_010 0.151359191 - - hypothetical protein CICLE_v10033238mg [Citrus clementina]
20 Hb_001104_210 0.1552519619 - - hypothetical protein JCGZ_23620 [Jatropha curcas]

Gene co-expression network

sample Hb_036069_020 Hb_036069_020 Hb_000911_050 Hb_000911_050 Hb_036069_020--Hb_000911_050 Hb_130563_010 Hb_130563_010 Hb_036069_020--Hb_130563_010 Hb_001758_120 Hb_001758_120 Hb_036069_020--Hb_001758_120 Hb_001377_010 Hb_001377_010 Hb_036069_020--Hb_001377_010 Hb_000207_340 Hb_000207_340 Hb_036069_020--Hb_000207_340 Hb_000797_030 Hb_000797_030 Hb_036069_020--Hb_000797_030 Hb_000911_050--Hb_000797_030 Hb_003097_200 Hb_003097_200 Hb_000911_050--Hb_003097_200 Hb_000911_050--Hb_001377_010 Hb_001545_270 Hb_001545_270 Hb_000911_050--Hb_001545_270 Hb_006637_040 Hb_006637_040 Hb_000911_050--Hb_006637_040 Hb_004223_180 Hb_004223_180 Hb_130563_010--Hb_004223_180 Hb_031931_030 Hb_031931_030 Hb_130563_010--Hb_031931_030 Hb_001218_070 Hb_001218_070 Hb_130563_010--Hb_001218_070 Hb_130563_010--Hb_000911_050 Hb_003398_090 Hb_003398_090 Hb_130563_010--Hb_003398_090 Hb_001758_120--Hb_006637_040 Hb_003893_100 Hb_003893_100 Hb_001758_120--Hb_003893_100 Hb_001758_120--Hb_000797_030 Hb_002749_070 Hb_002749_070 Hb_001758_120--Hb_002749_070 Hb_001758_120--Hb_003097_200 Hb_164283_010 Hb_164283_010 Hb_001758_120--Hb_164283_010 Hb_001136_030 Hb_001136_030 Hb_001377_010--Hb_001136_030 Hb_002870_010 Hb_002870_010 Hb_001377_010--Hb_002870_010 Hb_001104_210 Hb_001104_210 Hb_001377_010--Hb_001104_210 Hb_001514_070 Hb_001514_070 Hb_001377_010--Hb_001514_070 Hb_003090_180 Hb_003090_180 Hb_001377_010--Hb_003090_180 Hb_003177_080 Hb_003177_080 Hb_000207_340--Hb_003177_080 Hb_000207_340--Hb_000797_030 Hb_000207_340--Hb_003097_200 Hb_156499_010 Hb_156499_010 Hb_000207_340--Hb_156499_010 Hb_000207_340--Hb_000911_050 Hb_000797_030--Hb_003097_200 Hb_000797_030--Hb_003893_100 Hb_000797_030--Hb_006637_040 Hb_004316_130 Hb_004316_130 Hb_000797_030--Hb_004316_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.203479 0.75004 0.446591 3.11468 0 0.043747
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 11.1783 1.95261

CAGE analysis