Hb_036377_010

Information

Type -
Description -
Location Contig36377: 1-597
Sequence    

Annotation

kegg
ID rcu:RCOM_0646060
description ice binding protein, putative
nr
ID XP_012092179.1
description PREDICTED: uncharacterized protein LOC105649946 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JC34
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21882 PE=4 SV=1
Gene Ontology
ID GO:0005634
description ice binding

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_37390: 99-214
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_036377_010 0.0 - - PREDICTED: uncharacterized protein LOC105649946 [Jatropha curcas]
2 Hb_171810_020 0.0483220257 - - peptide/glutathione transporter OPT1 [Vitis vinifera]
3 Hb_005253_050 0.0642495852 - - Isoflavone reductase, putative [Ricinus communis]
4 Hb_004090_010 0.085371424 - - Major latex protein, putative [Ricinus communis]
5 Hb_000329_220 0.1379710888 transcription factor TF Family: C2C2-YABBY PREDICTED: axial regulator YABBY 1 [Jatropha curcas]
6 Hb_097104_010 0.1404773121 - - Chain A, Anomalous Substructure Of Hydroxynitrile Lyase
7 Hb_000556_050 0.1461021211 - - -
8 Hb_000032_130 0.148067809 - - PREDICTED: probable pectinesterase/pectinesterase inhibitor 12 [Jatropha curcas]
9 Hb_007741_010 0.1539668011 transcription factor TF Family: C2C2-YABBY PREDICTED: axial regulator YABBY 1 [Jatropha curcas]
10 Hb_017358_060 0.1564292991 - - PREDICTED: uncharacterized protein LOC105641510 [Jatropha curcas]
11 Hb_000190_200 0.1598698217 - - PREDICTED: uncharacterized protein LOC105649946 [Jatropha curcas]
12 Hb_000152_200 0.1670263612 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase ERL2 isoform X1 [Jatropha curcas]
13 Hb_000005_160 0.1699060405 - - tonoplast intrinsic protein, putative [Ricinus communis]
14 Hb_005198_010 0.1734625854 transcription factor TF Family: C2C2-YABBY PREDICTED: axial regulator YABBY 5 [Jatropha curcas]
15 Hb_006277_090 0.1802636477 - - PREDICTED: uncharacterized protein LOC105649700 [Jatropha curcas]
16 Hb_177533_010 0.1810096748 - - Serine/threonine-protein kinase-transforming protein raf, putative [Ricinus communis]
17 Hb_003398_110 0.1814558985 - - PREDICTED: uncharacterized protein LOC105647583 [Jatropha curcas]
18 Hb_004881_040 0.1842512092 - - PREDICTED: protodermal factor 1-like [Populus euphratica]
19 Hb_000103_170 0.1873799594 - - uncharacterized protein LOC100501254 [Zea mays]
20 Hb_000006_020 0.1874194823 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_036377_010 Hb_036377_010 Hb_171810_020 Hb_171810_020 Hb_036377_010--Hb_171810_020 Hb_005253_050 Hb_005253_050 Hb_036377_010--Hb_005253_050 Hb_004090_010 Hb_004090_010 Hb_036377_010--Hb_004090_010 Hb_000329_220 Hb_000329_220 Hb_036377_010--Hb_000329_220 Hb_097104_010 Hb_097104_010 Hb_036377_010--Hb_097104_010 Hb_000556_050 Hb_000556_050 Hb_036377_010--Hb_000556_050 Hb_171810_020--Hb_005253_050 Hb_171810_020--Hb_097104_010 Hb_000032_130 Hb_000032_130 Hb_171810_020--Hb_000032_130 Hb_171810_020--Hb_004090_010 Hb_017358_060 Hb_017358_060 Hb_171810_020--Hb_017358_060 Hb_005253_050--Hb_097104_010 Hb_005253_050--Hb_000032_130 Hb_005253_050--Hb_017358_060 Hb_006277_090 Hb_006277_090 Hb_005253_050--Hb_006277_090 Hb_004090_010--Hb_000329_220 Hb_007741_010 Hb_007741_010 Hb_004090_010--Hb_007741_010 Hb_000190_200 Hb_000190_200 Hb_004090_010--Hb_000190_200 Hb_004090_010--Hb_000556_050 Hb_000152_200 Hb_000152_200 Hb_004090_010--Hb_000152_200 Hb_000329_220--Hb_000190_200 Hb_000329_220--Hb_007741_010 Hb_004881_040 Hb_004881_040 Hb_000329_220--Hb_004881_040 Hb_000544_150 Hb_000544_150 Hb_000329_220--Hb_000544_150 Hb_162008_020 Hb_162008_020 Hb_000329_220--Hb_162008_020 Hb_097104_010--Hb_000032_130 Hb_097104_010--Hb_006277_090 Hb_000103_170 Hb_000103_170 Hb_097104_010--Hb_000103_170 Hb_099509_010 Hb_099509_010 Hb_097104_010--Hb_099509_010 Hb_005198_010 Hb_005198_010 Hb_000556_050--Hb_005198_010 Hb_000005_160 Hb_000005_160 Hb_000556_050--Hb_000005_160 Hb_000556_050--Hb_000152_200 Hb_019762_030 Hb_019762_030 Hb_000556_050--Hb_019762_030 Hb_177533_010 Hb_177533_010 Hb_000556_050--Hb_177533_010 Hb_000556_050--Hb_007741_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 3.66854 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.269772

CAGE analysis