Hb_036731_010

Information

Type -
Description -
Location Contig36731: 567-2043
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_036731_010 0.0 - - -
2 Hb_166210_010 0.0185298341 - - conserved hypothetical protein [Ricinus communis]
3 Hb_005714_120 0.0270027707 - - nucleic acid binding protein, putative [Ricinus communis]
4 Hb_002121_070 0.0581435213 - - conserved hypothetical protein [Ricinus communis]
5 Hb_001514_140 0.0719880451 - - -
6 Hb_018746_010 0.0818442983 - - PREDICTED: uncharacterized protein LOC105629982 [Jatropha curcas]
7 Hb_000362_100 0.0861904019 - - -
8 Hb_043960_010 0.0968441212 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
9 Hb_002233_050 0.1023731523 - - PREDICTED: uncharacterized protein LOC104879391 [Vitis vinifera]
10 Hb_005021_040 0.1116468713 - - PREDICTED: uncharacterized protein LOC103848240 [Brassica rapa]
11 Hb_007632_140 0.1140072033 - - -
12 Hb_002762_010 0.1216728658 - - hypothetical protein POPTR_0019s12360g [Populus trichocarpa]
13 Hb_002876_100 0.1235708017 - - hypothetical protein POPTR_0019s11600g [Populus trichocarpa]
14 Hb_005207_010 0.1244741469 - - PREDICTED: zinc finger Ran-binding domain-containing protein 2-like [Jatropha curcas]
15 Hb_019135_010 0.1261145556 - - -
16 Hb_006449_060 0.1269048054 - - PREDICTED: uncharacterized protein LOC104106381 [Nicotiana tomentosiformis]
17 Hb_010532_010 0.1274245931 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 isoform X1 [Populus euphratica]
18 Hb_006415_010 0.1310252731 - - -
19 Hb_002188_050 0.1365112179 - - PREDICTED: serine carboxypeptidase-like 2 [Jatropha curcas]
20 Hb_005337_010 0.1588901731 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Vitis vinifera]

Gene co-expression network

sample Hb_036731_010 Hb_036731_010 Hb_166210_010 Hb_166210_010 Hb_036731_010--Hb_166210_010 Hb_005714_120 Hb_005714_120 Hb_036731_010--Hb_005714_120 Hb_002121_070 Hb_002121_070 Hb_036731_010--Hb_002121_070 Hb_001514_140 Hb_001514_140 Hb_036731_010--Hb_001514_140 Hb_018746_010 Hb_018746_010 Hb_036731_010--Hb_018746_010 Hb_000362_100 Hb_000362_100 Hb_036731_010--Hb_000362_100 Hb_166210_010--Hb_005714_120 Hb_166210_010--Hb_001514_140 Hb_166210_010--Hb_018746_010 Hb_166210_010--Hb_002121_070 Hb_002233_050 Hb_002233_050 Hb_166210_010--Hb_002233_050 Hb_005714_120--Hb_002121_070 Hb_005714_120--Hb_000362_100 Hb_005714_120--Hb_001514_140 Hb_005021_040 Hb_005021_040 Hb_005714_120--Hb_005021_040 Hb_002121_070--Hb_000362_100 Hb_007632_140 Hb_007632_140 Hb_002121_070--Hb_007632_140 Hb_019135_010 Hb_019135_010 Hb_002121_070--Hb_019135_010 Hb_001514_140--Hb_018746_010 Hb_043960_010 Hb_043960_010 Hb_001514_140--Hb_043960_010 Hb_002762_010 Hb_002762_010 Hb_001514_140--Hb_002762_010 Hb_018746_010--Hb_002762_010 Hb_018746_010--Hb_043960_010 Hb_018746_010--Hb_005714_120 Hb_000362_100--Hb_007632_140 Hb_000362_100--Hb_019135_010 Hb_000362_100--Hb_043960_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.298472 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.256458 0.726226

CAGE analysis