Hb_036790_010

Information

Type -
Description -
Location Contig36790: 5351-6816
Sequence    

Annotation

kegg
ID cit:102617321
description GDSL esterase/lipase 1-like
nr
ID XP_012074470.1
description PREDICTED: GDSL esterase/lipase 1-like [Jatropha curcas]
swissprot
ID Q9FLN0
description GDSL esterase/lipase 1 OS=Arabidopsis thaliana GN=GLIP1 PE=1 SV=1
trembl
ID A0A067KII8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10012 PE=4 SV=1
Gene Ontology
ID GO:0016788
description gdsl esterase lipase 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_036790_010 0.0 - - PREDICTED: GDSL esterase/lipase 1-like [Jatropha curcas]
2 Hb_001369_280 0.0202223219 - - PREDICTED: pentatricopeptide repeat-containing protein At5g64320, mitochondrial-like isoform X3 [Solanum tuberosum]
3 Hb_000496_090 0.0327351255 - - PREDICTED: inhibitor of trypsin and hageman factor-like [Gossypium raimondii]
4 Hb_022137_030 0.055511544 - - PREDICTED: RING-H2 finger protein ATL66 [Jatropha curcas]
5 Hb_002740_020 0.0641283871 - - -
6 Hb_115472_010 0.0689453823 - - -
7 Hb_172503_010 0.0839604781 - - PREDICTED: uncharacterized protein LOC105647154 [Jatropha curcas]
8 Hb_103832_030 0.0847562235 - - PREDICTED: uncharacterized protein LOC105795045 [Gossypium raimondii]
9 Hb_083103_030 0.0885858646 - - putative retrotransposon protein [Malus domestica]
10 Hb_001995_020 0.0928594299 - - PREDICTED: trans-resveratrol di-O-methyltransferase-like [Populus euphratica]
11 Hb_012368_060 0.1955092527 - - -
12 Hb_011457_060 0.1959180575 - - PREDICTED: uncharacterized protein LOC105649957 [Jatropha curcas]
13 Hb_001999_110 0.1969198663 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Populus euphratica]
14 Hb_000635_120 0.1970343562 - - -
15 Hb_035492_010 0.2005396236 - - PREDICTED: uncharacterized protein LOC105796032 [Gossypium raimondii]
16 Hb_010267_010 0.2212276246 - - -
17 Hb_010120_010 0.2220997491 - - PREDICTED: uncharacterized protein LOC105634374 [Jatropha curcas]
18 Hb_001369_330 0.2227491886 - - conserved hypothetical protein [Ricinus communis]
19 Hb_004881_110 0.2228210084 - - -
20 Hb_000265_180 0.2246011504 - - Alpha/beta-Hydrolases superfamily protein, putative [Theobroma cacao]

Gene co-expression network

sample Hb_036790_010 Hb_036790_010 Hb_001369_280 Hb_001369_280 Hb_036790_010--Hb_001369_280 Hb_000496_090 Hb_000496_090 Hb_036790_010--Hb_000496_090 Hb_022137_030 Hb_022137_030 Hb_036790_010--Hb_022137_030 Hb_002740_020 Hb_002740_020 Hb_036790_010--Hb_002740_020 Hb_115472_010 Hb_115472_010 Hb_036790_010--Hb_115472_010 Hb_172503_010 Hb_172503_010 Hb_036790_010--Hb_172503_010 Hb_001369_280--Hb_000496_090 Hb_001369_280--Hb_022137_030 Hb_001369_280--Hb_002740_020 Hb_001369_280--Hb_115472_010 Hb_001369_280--Hb_172503_010 Hb_000496_090--Hb_022137_030 Hb_000496_090--Hb_002740_020 Hb_000496_090--Hb_115472_010 Hb_000496_090--Hb_172503_010 Hb_022137_030--Hb_002740_020 Hb_022137_030--Hb_115472_010 Hb_022137_030--Hb_172503_010 Hb_103832_030 Hb_103832_030 Hb_022137_030--Hb_103832_030 Hb_083103_030 Hb_083103_030 Hb_022137_030--Hb_083103_030 Hb_002740_020--Hb_115472_010 Hb_002740_020--Hb_172503_010 Hb_002740_020--Hb_103832_030 Hb_002740_020--Hb_083103_030 Hb_115472_010--Hb_172503_010 Hb_115472_010--Hb_103832_030 Hb_115472_010--Hb_083103_030 Hb_001995_020 Hb_001995_020 Hb_115472_010--Hb_001995_020 Hb_172503_010--Hb_103832_030 Hb_172503_010--Hb_083103_030 Hb_172503_010--Hb_001995_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0361251 0 0.0435033 0

CAGE analysis