Hb_036790_090

Information

Type -
Description -
Location Contig36790: 77771-78181
Sequence    

Annotation

kegg
ID rcu:RCOM_0296460
description hypothetical protein
nr
ID XP_002527089.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9SM70
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0296460 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_036790_090 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_000568_060 0.2676284429 - - PREDICTED: uncharacterized protein LOC105650906 [Jatropha curcas]
3 Hb_000029_080 0.2713275491 - - PREDICTED: cold-inducible RNA-binding protein B-like [Jatropha curcas]
4 Hb_002157_130 0.2771366869 - - -
5 Hb_002048_030 0.2865541527 - - PREDICTED: putative quinone-oxidoreductase homolog, chloroplastic [Jatropha curcas]
6 Hb_123199_010 0.2878208285 - - SRK protein [Brassica cretica]
7 Hb_012135_010 0.2891650544 - - PREDICTED: uncharacterized protein LOC105800880, partial [Gossypium raimondii]
8 Hb_013399_010 0.2900544135 - - PREDICTED: uncharacterized protein LOC105631404 isoform X2 [Jatropha curcas]
9 Hb_028341_010 0.2917787763 - - hypothetical protein CICLE_v10026841mg [Citrus clementina]
10 Hb_001377_400 0.2927903104 - - neutral/alkaline invertase [Manihot esculenta]
11 Hb_003073_050 0.293794244 transcription factor TF Family: B3 PREDICTED: B3 domain-containing protein Os03g0620400-like [Jatropha curcas]
12 Hb_005511_100 0.2974361953 - - PREDICTED: uncharacterized protein LOC105645493 isoform X1 [Jatropha curcas]
13 Hb_006018_070 0.2984866836 - - Cyclic nucleotide-gated ion channel, putative [Ricinus communis]
14 Hb_002972_010 0.298581787 - - PREDICTED: magnesium-dependent phosphatase 1 [Jatropha curcas]
15 Hb_156526_010 0.3036074047 - - PREDICTED: uncharacterized protein LOC105636715 [Jatropha curcas]
16 Hb_012033_020 0.3041178952 - - -
17 Hb_001623_100 0.3047346326 - - Hydroxyethylthiazole kinase, putative [Ricinus communis]
18 Hb_000228_090 0.3051699049 - - PREDICTED: protein PAM68, chloroplastic [Jatropha curcas]
19 Hb_000789_070 0.3055102779 - - conserved hypothetical protein [Ricinus communis]
20 Hb_164255_010 0.3057316605 - - PREDICTED: aspartate-semialdehyde dehydrogenase [Jatropha curcas]

Gene co-expression network

sample Hb_036790_090 Hb_036790_090 Hb_000568_060 Hb_000568_060 Hb_036790_090--Hb_000568_060 Hb_000029_080 Hb_000029_080 Hb_036790_090--Hb_000029_080 Hb_002157_130 Hb_002157_130 Hb_036790_090--Hb_002157_130 Hb_002048_030 Hb_002048_030 Hb_036790_090--Hb_002048_030 Hb_123199_010 Hb_123199_010 Hb_036790_090--Hb_123199_010 Hb_012135_010 Hb_012135_010 Hb_036790_090--Hb_012135_010 Hb_000568_060--Hb_000029_080 Hb_002092_120 Hb_002092_120 Hb_000568_060--Hb_002092_120 Hb_002686_190 Hb_002686_190 Hb_000568_060--Hb_002686_190 Hb_000950_070 Hb_000950_070 Hb_000568_060--Hb_000950_070 Hb_003848_040 Hb_003848_040 Hb_000568_060--Hb_003848_040 Hb_003020_210 Hb_003020_210 Hb_000568_060--Hb_003020_210 Hb_005211_180 Hb_005211_180 Hb_000029_080--Hb_005211_180 Hb_177215_040 Hb_177215_040 Hb_000029_080--Hb_177215_040 Hb_000045_300 Hb_000045_300 Hb_000029_080--Hb_000045_300 Hb_000164_100 Hb_000164_100 Hb_000029_080--Hb_000164_100 Hb_000029_080--Hb_002686_190 Hb_001369_610 Hb_001369_610 Hb_002157_130--Hb_001369_610 Hb_000679_050 Hb_000679_050 Hb_002157_130--Hb_000679_050 Hb_007416_050 Hb_007416_050 Hb_002157_130--Hb_007416_050 Hb_146673_010 Hb_146673_010 Hb_002157_130--Hb_146673_010 Hb_007533_010 Hb_007533_010 Hb_002157_130--Hb_007533_010 Hb_000300_080 Hb_000300_080 Hb_002157_130--Hb_000300_080 Hb_007894_210 Hb_007894_210 Hb_002048_030--Hb_007894_210 Hb_001623_100 Hb_001623_100 Hb_002048_030--Hb_001623_100 Hb_000123_140 Hb_000123_140 Hb_002048_030--Hb_000123_140 Hb_143766_020 Hb_143766_020 Hb_002048_030--Hb_143766_020 Hb_010367_030 Hb_010367_030 Hb_002048_030--Hb_010367_030 Hb_015292_040 Hb_015292_040 Hb_002048_030--Hb_015292_040 Hb_023936_010 Hb_023936_010 Hb_123199_010--Hb_023936_010 Hb_123199_010--Hb_000950_070 Hb_002972_010 Hb_002972_010 Hb_123199_010--Hb_002972_010 Hb_000011_570 Hb_000011_570 Hb_123199_010--Hb_000011_570 Hb_001712_070 Hb_001712_070 Hb_123199_010--Hb_001712_070 Hb_000008_370 Hb_000008_370 Hb_123199_010--Hb_000008_370 Hb_133311_010 Hb_133311_010 Hb_012135_010--Hb_133311_010 Hb_007333_010 Hb_007333_010 Hb_012135_010--Hb_007333_010 Hb_002045_140 Hb_002045_140 Hb_012135_010--Hb_002045_140 Hb_098546_010 Hb_098546_010 Hb_012135_010--Hb_098546_010 Hb_008667_040 Hb_008667_040 Hb_012135_010--Hb_008667_040 Hb_000264_290 Hb_000264_290 Hb_012135_010--Hb_000264_290
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0799687 0.294481 0.650057 0.140372 0.0809152 0.725813
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.378534 0.594642 0 0 0.263634

CAGE analysis