Hb_037373_010

Information

Type -
Description -
Location Contig37373: 691-6084
Sequence    

Annotation

kegg
ID cit:102621950
description uncharacterized LOC102621950
nr
ID XP_006494539.1
description PREDICTED: uncharacterized protein LOC102621950 [Citrus sinensis]
swissprot
ID -
description -
trembl
ID A0A067L7F8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19199 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_037373_010 0.0 - - PREDICTED: uncharacterized protein LOC102621950 [Citrus sinensis]
2 Hb_000603_210 0.1527691163 - - hypothetical protein POPTR_0006s23660g [Populus trichocarpa]
3 Hb_000444_030 0.1553241596 - - PREDICTED: expansin-A20 [Jatropha curcas]
4 Hb_003777_230 0.1821019843 - - PREDICTED: abscisic stress-ripening protein 1-like [Citrus sinensis]
5 Hb_043061_010 0.1822427597 - - Rho GDP-dissociation inhibitor, putative [Ricinus communis]
6 Hb_000184_180 0.1832539251 - - putative C3HC4-type RING zinc finger protein [Hevea brasiliensis]
7 Hb_005450_010 0.1937506987 - - PREDICTED: RNA-binding protein 24-B isoform X1 [Jatropha curcas]
8 Hb_001279_250 0.1947787239 - - PREDICTED: pectate lyase-like [Jatropha curcas]
9 Hb_001631_080 0.1980381311 - - PREDICTED: importin-5-like [Populus euphratica]
10 Hb_000052_010 0.1982120519 - - hypothetical protein M569_08416, partial [Genlisea aurea]
11 Hb_006816_440 0.2048715006 - - protein phosphatase 2c, putative [Ricinus communis]
12 Hb_000300_400 0.2066323391 - - hypothetical protein PHAVU_001G114100g [Phaseolus vulgaris]
13 Hb_002235_230 0.2069144045 - - latex abundant protein 1 [Hevea brasiliensis]
14 Hb_001514_180 0.2075335438 transcription factor TF Family: M-type hypothetical protein JCGZ_16067 [Jatropha curcas]
15 Hb_029879_080 0.2114424516 - - unknown [Populus trichocarpa]
16 Hb_003057_130 0.211848505 - - -
17 Hb_001723_080 0.2148219584 - - hypothetical protein L484_026139 [Morus notabilis]
18 Hb_000454_110 0.2157072172 - - PREDICTED: polyprenol reductase 2-like isoform X3 [Populus euphratica]
19 Hb_008557_020 0.217267279 - - PREDICTED: uncharacterized protein LOC105638665 [Jatropha curcas]
20 Hb_048141_010 0.2177906624 - - PREDICTED: protein STRICTOSIDINE SYNTHASE-LIKE 2 [Jatropha curcas]

Gene co-expression network

sample Hb_037373_010 Hb_037373_010 Hb_000603_210 Hb_000603_210 Hb_037373_010--Hb_000603_210 Hb_000444_030 Hb_000444_030 Hb_037373_010--Hb_000444_030 Hb_003777_230 Hb_003777_230 Hb_037373_010--Hb_003777_230 Hb_043061_010 Hb_043061_010 Hb_037373_010--Hb_043061_010 Hb_000184_180 Hb_000184_180 Hb_037373_010--Hb_000184_180 Hb_005450_010 Hb_005450_010 Hb_037373_010--Hb_005450_010 Hb_000300_400 Hb_000300_400 Hb_000603_210--Hb_000300_400 Hb_000603_210--Hb_003777_230 Hb_002235_230 Hb_002235_230 Hb_000603_210--Hb_002235_230 Hb_006816_440 Hb_006816_440 Hb_000603_210--Hb_006816_440 Hb_000603_210--Hb_000444_030 Hb_149683_010 Hb_149683_010 Hb_000603_210--Hb_149683_010 Hb_001741_080 Hb_001741_080 Hb_000444_030--Hb_001741_080 Hb_000444_030--Hb_000184_180 Hb_001514_180 Hb_001514_180 Hb_000444_030--Hb_001514_180 Hb_000444_030--Hb_006816_440 Hb_000041_070 Hb_000041_070 Hb_000444_030--Hb_000041_070 Hb_000444_030--Hb_043061_010 Hb_000052_010 Hb_000052_010 Hb_003777_230--Hb_000052_010 Hb_010166_020 Hb_010166_020 Hb_003777_230--Hb_010166_020 Hb_007741_040 Hb_007741_040 Hb_003777_230--Hb_007741_040 Hb_001007_050 Hb_001007_050 Hb_003777_230--Hb_001007_050 Hb_004055_060 Hb_004055_060 Hb_003777_230--Hb_004055_060 Hb_115919_020 Hb_115919_020 Hb_043061_010--Hb_115919_020 Hb_001892_150 Hb_001892_150 Hb_043061_010--Hb_001892_150 Hb_000284_010 Hb_000284_010 Hb_043061_010--Hb_000284_010 Hb_134789_010 Hb_134789_010 Hb_043061_010--Hb_134789_010 Hb_043061_010--Hb_000184_180 Hb_000184_180--Hb_006816_440 Hb_000184_180--Hb_000052_010 Hb_000184_180--Hb_001741_080 Hb_000184_180--Hb_115919_020 Hb_007747_130 Hb_007747_130 Hb_000184_180--Hb_007747_130 Hb_005450_010--Hb_001892_150 Hb_001631_080 Hb_001631_080 Hb_005450_010--Hb_001631_080 Hb_005450_010--Hb_000284_010 Hb_005450_010--Hb_043061_010 Hb_029879_080 Hb_029879_080 Hb_005450_010--Hb_029879_080 Hb_005450_010--Hb_001741_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.306857 0 0 0 0.217396 0.777004
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.8478 0.749943 0.320329 0.0243271 0

CAGE analysis