Hb_037793_010

Information

Type -
Description -
Location Contig37793: 347-2711
Sequence    

Annotation

kegg
ID cmo:103495819
description microtubule-associated protein 70-2-like
nr
ID XP_012082560.1
description PREDICTED: microtubule-associated protein 70-2-like [Jatropha curcas]
swissprot
ID Q6Z746
description Microtubule-associated protein 70-2 OS=Oryza sativa subsp. japonica GN=MAP70.2 PE=2 SV=1
trembl
ID A0A0A0KYG0
description Uncharacterized protein OS=Cucumis sativus GN=Csa_4G431900 PE=4 SV=1
Gene Ontology
ID GO:0008017
description microtubule-associated protein 70-2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_037793_010 0.0 - - PREDICTED: microtubule-associated protein 70-2-like [Jatropha curcas]
2 Hb_000062_060 0.1292529533 transcription factor TF Family: Orphans multi-sensor hybrid histidine kinase [Plautia stali symbiont]
3 Hb_011206_010 0.146102268 - - PREDICTED: something about silencing protein 10 isoform X2 [Vitis vinifera]
4 Hb_000021_020 0.149117782 - - PREDICTED: zinc-metallopeptidase, peroxisomal-like [Malus domestica]
5 Hb_001508_020 0.1544715781 - - myosin vIII, putative [Ricinus communis]
6 Hb_000085_090 0.1603430755 - - hypothetical protein JCGZ_00955 [Jatropha curcas]
7 Hb_007456_010 0.163038238 - - hypothetical protein L484_003540 [Morus notabilis]
8 Hb_001731_020 0.1661467003 - - PREDICTED: T-complex protein 1 subunit gamma-like [Jatropha curcas]
9 Hb_004770_050 0.1674059061 - - PREDICTED: serine carboxypeptidase-like 35 [Populus euphratica]
10 Hb_002815_060 0.1674480214 - - hypothetical protein B456_002G110500 [Gossypium raimondii]
11 Hb_121467_010 0.1701040485 - - tubulin-specific chaperone E, putative [Ricinus communis]
12 Hb_019053_020 0.176471572 - - hypothetical protein MIMGU_mgv1a0105441mg, partial [Erythranthe guttata]
13 Hb_000189_510 0.180222427 - - PREDICTED: probable serine/threonine-protein kinase WNK9 [Jatropha curcas]
14 Hb_003529_130 0.1818282287 - - PREDICTED: ribosome biogenesis protein BOP1 homolog isoform X1 [Jatropha curcas]
15 Hb_000486_060 0.1829610394 - - PREDICTED: immediate early response 3-interacting protein 1-like isoform X2 [Glycine max]
16 Hb_162040_010 0.1847210118 - - -
17 Hb_008029_020 0.1848990073 - - PREDICTED: uncharacterized protein LOC105631777 [Jatropha curcas]
18 Hb_088428_010 0.1865302582 - - PREDICTED: E3 ubiquitin-protein ligase RNF181 homolog [Jatropha curcas]
19 Hb_000256_210 0.1869410541 - - PREDICTED: 40S ribosomal protein S11-like [Phoenix dactylifera]
20 Hb_002235_120 0.1871413043 - - hypothetical protein B456_002G103400 [Gossypium raimondii]

Gene co-expression network

sample Hb_037793_010 Hb_037793_010 Hb_000062_060 Hb_000062_060 Hb_037793_010--Hb_000062_060 Hb_011206_010 Hb_011206_010 Hb_037793_010--Hb_011206_010 Hb_000021_020 Hb_000021_020 Hb_037793_010--Hb_000021_020 Hb_001508_020 Hb_001508_020 Hb_037793_010--Hb_001508_020 Hb_000085_090 Hb_000085_090 Hb_037793_010--Hb_000085_090 Hb_007456_010 Hb_007456_010 Hb_037793_010--Hb_007456_010 Hb_005144_030 Hb_005144_030 Hb_000062_060--Hb_005144_030 Hb_000136_190 Hb_000136_190 Hb_000062_060--Hb_000136_190 Hb_000062_060--Hb_011206_010 Hb_000062_060--Hb_001508_020 Hb_002815_060 Hb_002815_060 Hb_000062_060--Hb_002815_060 Hb_011206_010--Hb_002815_060 Hb_001731_020 Hb_001731_020 Hb_011206_010--Hb_001731_020 Hb_000213_070 Hb_000213_070 Hb_011206_010--Hb_000213_070 Hb_011206_010--Hb_000085_090 Hb_171788_010 Hb_171788_010 Hb_011206_010--Hb_171788_010 Hb_019053_020 Hb_019053_020 Hb_011206_010--Hb_019053_020 Hb_003529_130 Hb_003529_130 Hb_000021_020--Hb_003529_130 Hb_011609_170 Hb_011609_170 Hb_000021_020--Hb_011609_170 Hb_002307_350 Hb_002307_350 Hb_000021_020--Hb_002307_350 Hb_006915_020 Hb_006915_020 Hb_000021_020--Hb_006915_020 Hb_005408_020 Hb_005408_020 Hb_000021_020--Hb_005408_020 Hb_008725_130 Hb_008725_130 Hb_000021_020--Hb_008725_130 Hb_001508_020--Hb_003529_130 Hb_010925_020 Hb_010925_020 Hb_001508_020--Hb_010925_020 Hb_001369_350 Hb_001369_350 Hb_001508_020--Hb_001369_350 Hb_001508_020--Hb_000021_020 Hb_003894_040 Hb_003894_040 Hb_001508_020--Hb_003894_040 Hb_018202_050 Hb_018202_050 Hb_001508_020--Hb_018202_050 Hb_001492_010 Hb_001492_010 Hb_000085_090--Hb_001492_010 Hb_003050_370 Hb_003050_370 Hb_000085_090--Hb_003050_370 Hb_000703_210 Hb_000703_210 Hb_000085_090--Hb_000703_210 Hb_000959_250 Hb_000959_250 Hb_000085_090--Hb_000959_250 Hb_000085_090--Hb_000213_070 Hb_000453_140 Hb_000453_140 Hb_007456_010--Hb_000453_140 Hb_027380_030 Hb_027380_030 Hb_007456_010--Hb_027380_030 Hb_007456_010--Hb_002307_350 Hb_007456_010--Hb_006915_020 Hb_007456_010--Hb_000021_020 Hb_001198_150 Hb_001198_150 Hb_007456_010--Hb_001198_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
12.6146 4.25156 12.1285 8.59752 12.5423 27.1378
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.73721 0.717571 2.4832 10.6508 2.32108

CAGE analysis