Hb_038670_010

Information

Type -
Description -
Location Contig38670: 198-972
Sequence    

Annotation

kegg
ID rcu:RCOM_1000670
description Major allergen Pru ar, putative
nr
ID XP_002519238.1
description Major allergen Pru ar, putative [Ricinus communis]
swissprot
ID O50001
description Major allergen Pru ar 1 OS=Prunus armeniaca PE=1 SV=1
trembl
ID B9RZR9
description Major allergen Pru ar, putative OS=Ricinus communis GN=RCOM_1000670 PE=3 SV=1
Gene Ontology
ID GO:0006952
description major allergen pru

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_038670_010 0.0 - - Major allergen Pru ar, putative [Ricinus communis]
2 Hb_008783_020 0.1214444029 - - hypothetical protein JCGZ_21284 [Jatropha curcas]
3 Hb_000034_030 0.1227723257 - - protein phosphatase 2c, putative [Ricinus communis]
4 Hb_000521_360 0.1238869628 - - PREDICTED: beta-glucosidase 17-like [Jatropha curcas]
5 Hb_005276_220 0.1291897538 transcription factor TF Family: bHLH PREDICTED: basic helix-loop-helix protein A [Jatropha curcas]
6 Hb_001006_280 0.1350497316 - - PREDICTED: glutamate decarboxylase 4 [Jatropha curcas]
7 Hb_000403_110 0.1357043053 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 51 [Jatropha curcas]
8 Hb_005237_040 0.1378253083 - - PREDICTED: uncharacterized protein LOC105630923 [Jatropha curcas]
9 Hb_009785_010 0.1403106848 - - PREDICTED: uncharacterized protein LOC105648749 [Jatropha curcas]
10 Hb_107809_010 0.1427651955 - - JHL06P13.14 [Jatropha curcas]
11 Hb_175758_010 0.14322353 - - PREDICTED: aspartic proteinase A1-like isoform X2 [Jatropha curcas]
12 Hb_005542_040 0.143673571 transcription factor TF Family: WRKY PREDICTED: WRKY transcription factor 55 [Jatropha curcas]
13 Hb_001318_120 0.1453867414 - - PREDICTED: uncharacterized protein LOC105642675 [Jatropha curcas]
14 Hb_010519_020 0.1475541179 - - hypothetical protein JCGZ_19028 [Jatropha curcas]
15 Hb_011472_020 0.1476175624 - - PREDICTED: mucin-17-like [Jatropha curcas]
16 Hb_004884_200 0.1504778885 - - PREDICTED: ferritin-3, chloroplastic [Jatropha curcas]
17 Hb_001565_010 0.1546330427 - - hypothetical protein JCGZ_07371 [Jatropha curcas]
18 Hb_014037_010 0.1559892318 - - PREDICTED: uncharacterized protein LOC105641871 [Jatropha curcas]
19 Hb_000011_120 0.15685368 - - PREDICTED: ATPase 10, plasma membrane-type-like [Populus euphratica]
20 Hb_007919_030 0.1594827358 - - -

Gene co-expression network

sample Hb_038670_010 Hb_038670_010 Hb_008783_020 Hb_008783_020 Hb_038670_010--Hb_008783_020 Hb_000034_030 Hb_000034_030 Hb_038670_010--Hb_000034_030 Hb_000521_360 Hb_000521_360 Hb_038670_010--Hb_000521_360 Hb_005276_220 Hb_005276_220 Hb_038670_010--Hb_005276_220 Hb_001006_280 Hb_001006_280 Hb_038670_010--Hb_001006_280 Hb_000403_110 Hb_000403_110 Hb_038670_010--Hb_000403_110 Hb_008783_020--Hb_000403_110 Hb_107809_010 Hb_107809_010 Hb_008783_020--Hb_107809_010 Hb_008783_020--Hb_005276_220 Hb_001102_270 Hb_001102_270 Hb_008783_020--Hb_001102_270 Hb_001421_010 Hb_001421_010 Hb_008783_020--Hb_001421_010 Hb_175758_010 Hb_175758_010 Hb_008783_020--Hb_175758_010 Hb_000034_030--Hb_001006_280 Hb_000963_200 Hb_000963_200 Hb_000034_030--Hb_000963_200 Hb_000236_050 Hb_000236_050 Hb_000034_030--Hb_000236_050 Hb_005237_040 Hb_005237_040 Hb_000034_030--Hb_005237_040 Hb_001405_150 Hb_001405_150 Hb_000034_030--Hb_001405_150 Hb_001345_010 Hb_001345_010 Hb_000521_360--Hb_001345_010 Hb_000521_360--Hb_107809_010 Hb_005542_040 Hb_005542_040 Hb_000521_360--Hb_005542_040 Hb_001565_010 Hb_001565_010 Hb_000521_360--Hb_001565_010 Hb_000521_360--Hb_005276_220 Hb_007676_040 Hb_007676_040 Hb_000521_360--Hb_007676_040 Hb_011472_020 Hb_011472_020 Hb_005276_220--Hb_011472_020 Hb_005276_220--Hb_000403_110 Hb_001318_120 Hb_001318_120 Hb_005276_220--Hb_001318_120 Hb_005276_220--Hb_005542_040 Hb_005276_220--Hb_175758_010 Hb_010519_020 Hb_010519_020 Hb_005276_220--Hb_010519_020 Hb_001006_280--Hb_001405_150 Hb_043768_010 Hb_043768_010 Hb_001006_280--Hb_043768_010 Hb_000720_210 Hb_000720_210 Hb_001006_280--Hb_000720_210 Hb_001365_050 Hb_001365_050 Hb_001006_280--Hb_001365_050 Hb_000403_110--Hb_001421_010 Hb_000403_110--Hb_010519_020 Hb_000403_110--Hb_175758_010 Hb_000403_110--Hb_001318_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 9.80532 6.78716 3.97789 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.23855 0.13908 0.123144 19.8928 6.13814

CAGE analysis