Hb_038718_010

Information

Type -
Description -
Location Contig38718: 158-691
Sequence    

Annotation

kegg
ID rcu:RCOM_1331600
description Disease resistance protein RFL1, putative (EC:3.1.3.16)
nr
ID XP_002521789.1
description Disease resistance protein RFL1, putative [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9S720
description Disease resistance protein RFL1, putative OS=Ricinus communis GN=RCOM_1331600 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_038718_010 0.0 - - Disease resistance protein RFL1, putative [Ricinus communis]
2 Hb_000128_090 0.0819056886 - - Reticuline oxidase precursor, putative [Ricinus communis]
3 Hb_010642_010 0.0955284764 - - PREDICTED: aquaporin TIP2-1 [Jatropha curcas]
4 Hb_002035_020 0.1014987573 transcription factor TF Family: TRAF hypothetical protein B456_011G050200 [Gossypium raimondii]
5 Hb_170632_010 0.1062919549 - - anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]
6 Hb_011355_020 0.1175526988 - - extensin, proline-rich protein, putative [Ricinus communis]
7 Hb_033053_020 0.1175609614 - - hypothetical protein JCGZ_01204 [Jatropha curcas]
8 Hb_002897_030 0.1188065803 - - PREDICTED: methylesterase 17 [Jatropha curcas]
9 Hb_004659_100 0.1203084528 - - conserved hypothetical protein [Ricinus communis]
10 Hb_001198_180 0.1257076811 - - RecName: Full=Anthocyanidin 3-O-glucosyltransferase 1; AltName: Full=Flavonol 3-O-glucosyltransferase 1; AltName: Full=UDP-glucose flavonoid 3-O-glucosyltransferase 1 [Manihot esculenta]
11 Hb_145268_010 0.1303615662 - - PREDICTED: proline-rich receptor-like protein kinase PERK15 [Jatropha curcas]
12 Hb_003939_090 0.1303865087 transcription factor TF Family: NAC transcription factor, putative [Ricinus communis]
13 Hb_042491_010 0.1307128174 - - JHL06P13.14 [Jatropha curcas]
14 Hb_002325_050 0.130911448 transcription factor TF Family: MYB MYB transcriptional factor [Populus nigra]
15 Hb_000060_080 0.1314913932 transcription factor TF Family: BES1 BRASSINAZOLE-RESISTANT 2 protein, putative [Ricinus communis]
16 Hb_002894_040 0.1316904427 - - conserved hypothetical protein [Ricinus communis]
17 Hb_030827_080 0.1327545015 - - PREDICTED: uncharacterized protein LOC105648491 [Jatropha curcas]
18 Hb_148914_020 0.1351623822 - - PREDICTED: uncharacterized protein LOC105637821 [Jatropha curcas]
19 Hb_007313_050 0.136028096 - - Histidine-containing phosphotransfer protein, putative [Ricinus communis]
20 Hb_006026_020 0.1360442916 - - PREDICTED: BTB/POZ domain-containing protein At5g48800 [Jatropha curcas]

Gene co-expression network

sample Hb_038718_010 Hb_038718_010 Hb_000128_090 Hb_000128_090 Hb_038718_010--Hb_000128_090 Hb_010642_010 Hb_010642_010 Hb_038718_010--Hb_010642_010 Hb_002035_020 Hb_002035_020 Hb_038718_010--Hb_002035_020 Hb_170632_010 Hb_170632_010 Hb_038718_010--Hb_170632_010 Hb_011355_020 Hb_011355_020 Hb_038718_010--Hb_011355_020 Hb_033053_020 Hb_033053_020 Hb_038718_010--Hb_033053_020 Hb_148914_020 Hb_148914_020 Hb_000128_090--Hb_148914_020 Hb_145268_010 Hb_145268_010 Hb_000128_090--Hb_145268_010 Hb_001213_080 Hb_001213_080 Hb_000128_090--Hb_001213_080 Hb_000128_090--Hb_010642_010 Hb_048937_010 Hb_048937_010 Hb_000128_090--Hb_048937_010 Hb_030827_080 Hb_030827_080 Hb_010642_010--Hb_030827_080 Hb_002739_160 Hb_002739_160 Hb_010642_010--Hb_002739_160 Hb_008352_020 Hb_008352_020 Hb_010642_010--Hb_008352_020 Hb_003939_090 Hb_003939_090 Hb_010642_010--Hb_003939_090 Hb_001198_180 Hb_001198_180 Hb_010642_010--Hb_001198_180 Hb_002035_020--Hb_048937_010 Hb_002035_020--Hb_000128_090 Hb_004096_140 Hb_004096_140 Hb_002035_020--Hb_004096_140 Hb_001019_140 Hb_001019_140 Hb_002035_020--Hb_001019_140 Hb_002035_020--Hb_001213_080 Hb_000060_080 Hb_000060_080 Hb_170632_010--Hb_000060_080 Hb_000975_090 Hb_000975_090 Hb_170632_010--Hb_000975_090 Hb_170632_010--Hb_001198_180 Hb_001663_090 Hb_001663_090 Hb_170632_010--Hb_001663_090 Hb_002676_110 Hb_002676_110 Hb_170632_010--Hb_002676_110 Hb_002897_030 Hb_002897_030 Hb_011355_020--Hb_002897_030 Hb_006026_020 Hb_006026_020 Hb_011355_020--Hb_006026_020 Hb_004031_050 Hb_004031_050 Hb_011355_020--Hb_004031_050 Hb_011355_020--Hb_001198_180 Hb_005214_050 Hb_005214_050 Hb_011355_020--Hb_005214_050 Hb_000373_260 Hb_000373_260 Hb_011355_020--Hb_000373_260 Hb_004659_100 Hb_004659_100 Hb_033053_020--Hb_004659_100 Hb_087427_010 Hb_087427_010 Hb_033053_020--Hb_087427_010 Hb_004631_100 Hb_004631_100 Hb_033053_020--Hb_004631_100 Hb_000631_100 Hb_000631_100 Hb_033053_020--Hb_000631_100 Hb_008021_040 Hb_008021_040 Hb_033053_020--Hb_008021_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.183734 16.2259 9.62185 29.8819 0.343934 0.0926057
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 6.58718 0.89893

CAGE analysis