Hb_039046_010

Information

Type -
Description -
Location Contig39046: 326-904
Sequence    

Annotation

kegg
ID sly:101251765
description uncharacterized LOC101251765
nr
ID XP_012084675.1
description PREDICTED: uncharacterized protein LOC105644040 isoform X2 [Jatropha curcas]
swissprot
ID Q9SS87
description Protein SIEVE ELEMENT OCCLUSION B OS=Arabidopsis thaliana GN=SEOB PE=1 SV=1
trembl
ID A0A067LLK5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15089 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_039046_010 0.0 - - PREDICTED: uncharacterized protein LOC105644040 isoform X2 [Jatropha curcas]
2 Hb_009615_140 0.0016464659 - - PREDICTED: alpha-galactosidase-like isoform X2 [Pyrus x bretschneideri]
3 Hb_126871_010 0.0019604221 - - PREDICTED: probable protein phosphatase 2C 38 [Jatropha curcas]
4 Hb_000172_040 0.002386153 - - Tetratricopeptide repeat protein, putative [Ricinus communis]
5 Hb_006111_050 0.0044670317 transcription factor TF Family: AP2 Protein AINTEGUMENTA, putative [Ricinus communis]
6 Hb_004324_180 0.0052186008 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
7 Hb_008895_010 0.0065610802 - - conserved hypothetical protein [Ricinus communis]
8 Hb_004881_090 0.008740395 - - hypothetical protein POPTR_0002s06050g [Populus trichocarpa]
9 Hb_000834_120 0.011221348 transcription factor TF Family: OFP PREDICTED: transcription repressor OFP8 [Populus euphratica]
10 Hb_000373_090 0.0126066388 - - PREDICTED: abscisic acid 8'-hydroxylase 3-like [Prunus mume]
11 Hb_003486_040 0.0129467181 - - PREDICTED: glutamic acid-rich protein-like [Jatropha curcas]
12 Hb_000049_320 0.0138919465 - - PREDICTED: probable indole-3-pyruvate monooxygenase YUCCA5 [Jatropha curcas]
13 Hb_176760_010 0.0149187727 - - PREDICTED: uncharacterized protein LOC105641027 [Jatropha curcas]
14 Hb_008686_050 0.0186988824 - - -
15 Hb_007058_020 0.0221438868 - - -
16 Hb_001926_060 0.0231227275 - - PREDICTED: uncharacterized protein LOC105649615 isoform X2 [Jatropha curcas]
17 Hb_163180_010 0.0242260382 - - hypothetical protein JCGZ_26658 [Jatropha curcas]
18 Hb_001248_160 0.0281474839 transcription factor TF Family: C2H2 TRANSPARENT TESTA 1 protein, putative [Ricinus communis]
19 Hb_003914_040 0.0307926799 - - hypothetical protein EUGRSUZ_H02626 [Eucalyptus grandis]
20 Hb_007040_020 0.0308002334 - - -

Gene co-expression network

sample Hb_039046_010 Hb_039046_010 Hb_009615_140 Hb_009615_140 Hb_039046_010--Hb_009615_140 Hb_126871_010 Hb_126871_010 Hb_039046_010--Hb_126871_010 Hb_000172_040 Hb_000172_040 Hb_039046_010--Hb_000172_040 Hb_006111_050 Hb_006111_050 Hb_039046_010--Hb_006111_050 Hb_004324_180 Hb_004324_180 Hb_039046_010--Hb_004324_180 Hb_008895_010 Hb_008895_010 Hb_039046_010--Hb_008895_010 Hb_009615_140--Hb_126871_010 Hb_009615_140--Hb_000172_040 Hb_009615_140--Hb_006111_050 Hb_009615_140--Hb_004324_180 Hb_004881_090 Hb_004881_090 Hb_009615_140--Hb_004881_090 Hb_126871_010--Hb_000172_040 Hb_126871_010--Hb_006111_050 Hb_126871_010--Hb_004881_090 Hb_126871_010--Hb_004324_180 Hb_000172_040--Hb_006111_050 Hb_000172_040--Hb_004881_090 Hb_000172_040--Hb_004324_180 Hb_006111_050--Hb_004881_090 Hb_000834_120 Hb_000834_120 Hb_006111_050--Hb_000834_120 Hb_004324_180--Hb_008895_010 Hb_004324_180--Hb_006111_050 Hb_008895_010--Hb_009615_140 Hb_176760_010 Hb_176760_010 Hb_008895_010--Hb_176760_010 Hb_008895_010--Hb_126871_010 Hb_008895_010--Hb_000172_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0546889 0.17904 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis