Hb_039363_010

Information

Type -
Description -
Location Contig39363: 3074-3823
Sequence    

Annotation

kegg
ID rcu:RCOM_1417700
description cytochrome P450, putative (EC:1.14.13.88)
nr
ID XP_012085830.1
description PREDICTED: cytochrome P450 CYP82D47-like [Jatropha curcas]
swissprot
ID O49394
description Cytochrome P450 82C2 OS=Arabidopsis thaliana GN=CYP82C2 PE=2 SV=2
trembl
ID A0A067JR41
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17505 PE=3 SV=1
Gene Ontology
ID GO:0004497
description cytochrome p450 cyp82d47-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_039363_010 0.0 - - PREDICTED: cytochrome P450 CYP82D47-like [Jatropha curcas]
2 Hb_002835_020 0.029330193 - - PREDICTED: cytochrome P450 71A1-like [Jatropha curcas]
3 Hb_000563_060 0.0374281047 - - PREDICTED: uncharacterized protein LOC100306381 isoform X1 [Glycine max]
4 Hb_000388_160 0.0387028226 - - xyloglucan endo-1 family protein [Populus trichocarpa]
5 Hb_109163_010 0.0455238473 - - polyphenol oxidase [Hevea brasiliensis]
6 Hb_153208_010 0.0474643235 - - Cationic peroxidase 2 precursor, putative [Ricinus communis]
7 Hb_004190_030 0.0525941979 - - unnamed protein product [Vitis vinifera]
8 Hb_003334_080 0.0560239268 - - Reticuline oxidase precursor, putative [Ricinus communis]
9 Hb_001140_330 0.0585560013 - - PREDICTED: uncharacterized protein LOC105142675 [Populus euphratica]
10 Hb_002553_170 0.0606680821 - - PREDICTED: early nodulin-75-like [Jatropha curcas]
11 Hb_004267_050 0.0621206662 - - hypothetical protein JCGZ_04357 [Jatropha curcas]
12 Hb_000500_190 0.0628621068 - - hypothetical protein JCGZ_21655 [Jatropha curcas]
13 Hb_003188_020 0.0639069498 - - chitinase, putative [Ricinus communis]
14 Hb_005433_050 0.0642609008 - - PREDICTED: uncharacterized protein At1g66480-like [Populus euphratica]
15 Hb_003073_020 0.0646188814 - - protein binding protein, putative [Ricinus communis]
16 Hb_002944_020 0.0665963523 transcription factor TF Family: bZIP hypothetical protein POPTR_0006s05770g, partial [Populus trichocarpa]
17 Hb_000229_080 0.0667058489 - - PREDICTED: cytochrome P450 CYP82D47-like [Jatropha curcas]
18 Hb_038238_010 0.0674759878 - - hypothetical protein POPTR_0001s30980g [Populus trichocarpa]
19 Hb_003119_110 0.0675476419 - - PREDICTED: feruloyl CoA ortho-hydroxylase 2-like [Jatropha curcas]
20 Hb_001930_060 0.0688165514 - - PREDICTED: cytochrome P450 71D9-like [Fragaria vesca subsp. vesca]

Gene co-expression network

sample Hb_039363_010 Hb_039363_010 Hb_002835_020 Hb_002835_020 Hb_039363_010--Hb_002835_020 Hb_000563_060 Hb_000563_060 Hb_039363_010--Hb_000563_060 Hb_000388_160 Hb_000388_160 Hb_039363_010--Hb_000388_160 Hb_109163_010 Hb_109163_010 Hb_039363_010--Hb_109163_010 Hb_153208_010 Hb_153208_010 Hb_039363_010--Hb_153208_010 Hb_004190_030 Hb_004190_030 Hb_039363_010--Hb_004190_030 Hb_002835_020--Hb_000563_060 Hb_002553_170 Hb_002553_170 Hb_002835_020--Hb_002553_170 Hb_002835_020--Hb_000388_160 Hb_003334_080 Hb_003334_080 Hb_002835_020--Hb_003334_080 Hb_001930_060 Hb_001930_060 Hb_002835_020--Hb_001930_060 Hb_000563_060--Hb_004190_030 Hb_001140_330 Hb_001140_330 Hb_000563_060--Hb_001140_330 Hb_003119_110 Hb_003119_110 Hb_000563_060--Hb_003119_110 Hb_000563_060--Hb_153208_010 Hb_000388_160--Hb_000563_060 Hb_000388_160--Hb_153208_010 Hb_000388_160--Hb_109163_010 Hb_000388_160--Hb_003334_080 Hb_109163_010--Hb_153208_010 Hb_000086_710 Hb_000086_710 Hb_109163_010--Hb_000086_710 Hb_109163_010--Hb_002835_020 Hb_109163_010--Hb_000563_060 Hb_004057_050 Hb_004057_050 Hb_109163_010--Hb_004057_050 Hb_003188_020 Hb_003188_020 Hb_153208_010--Hb_003188_020 Hb_002944_020 Hb_002944_020 Hb_153208_010--Hb_002944_020 Hb_010358_010 Hb_010358_010 Hb_153208_010--Hb_010358_010 Hb_014034_020 Hb_014034_020 Hb_153208_010--Hb_014034_020 Hb_004190_030--Hb_003119_110 Hb_004190_030--Hb_001140_330 Hb_004267_050 Hb_004267_050 Hb_004190_030--Hb_004267_050 Hb_004190_030--Hb_010358_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.7104 0.412471 1.15116 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 130.985 0.461426

CAGE analysis