Hb_040153_010

Information

Type -
Description -
Location Contig40153: 540-1693
Sequence    

Annotation

kegg
ID tcc:TCM_004227
description Class I glutamine amidotransferase-like superfamily protein
nr
ID XP_012092132.1
description PREDICTED: DJ-1 protein homolog E-like [Jatropha curcas]
swissprot
ID Q9ZV19
description DJ-1 protein homolog E OS=Arabidopsis thaliana GN=DJ1E PE=1 SV=1
trembl
ID A0A067JMY3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21851 PE=4 SV=1
Gene Ontology
ID GO:0016787
description dj-1 protein homolog e-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_040153_010 0.0 - - PREDICTED: DJ-1 protein homolog E-like [Jatropha curcas]
2 Hb_075745_020 0.1934083313 - - PREDICTED: uncharacterized protein LOC105649606 isoform X1 [Jatropha curcas]
3 Hb_003750_060 0.2000574783 - - PREDICTED: protein TIC 40, chloroplastic [Jatropha curcas]
4 Hb_000487_420 0.2070271773 transcription factor TF Family: TRAF PREDICTED: BTB/POZ domain-containing protein At1g04390 [Jatropha curcas]
5 Hb_004079_120 0.2078451204 - - PREDICTED: splicing factor, arginine/serine-rich 19 [Jatropha curcas]
6 Hb_002739_130 0.2081962665 - - PREDICTED: pre-mRNA-splicing factor 38B-like [Populus euphratica]
7 Hb_011918_050 0.208942624 - - -
8 Hb_002701_150 0.212517142 - - PREDICTED: probable tRNA (guanine(26)-N(2))-dimethyltransferase 2 isoform X2 [Jatropha curcas]
9 Hb_008103_080 0.2141200107 - - PREDICTED: lycopene epsilon cyclase, chloroplastic [Jatropha curcas]
10 Hb_002150_110 0.2143473574 - - PREDICTED: probable beta-1,3-galactosyltransferase 11 [Jatropha curcas]
11 Hb_000963_130 0.2145318186 - - RNA m5u methyltransferase, putative [Ricinus communis]
12 Hb_002045_150 0.2157197608 - - histone acetyltransferase gcn5, putative [Ricinus communis]
13 Hb_000329_590 0.2158199109 - - catalytic, putative [Ricinus communis]
14 Hb_008887_020 0.215885105 - - PREDICTED: uncharacterized protein LOC105636191 [Jatropha curcas]
15 Hb_009449_090 0.2160945796 - - PREDICTED: RNA-binding protein 25 isoform X1 [Jatropha curcas]
16 Hb_002374_280 0.2170330937 - - -
17 Hb_006452_160 0.2171101544 - - structural constituent of ribosome, putative [Ricinus communis]
18 Hb_001638_090 0.2187752784 - - GRF1-INTERACTING FACTOR 2 family protein [Populus trichocarpa]
19 Hb_003638_010 0.2191302732 transcription factor TF Family: ARID PREDICTED: lysine-specific demethylase 5B isoform X2 [Jatropha curcas]
20 Hb_000556_100 0.2209892311 - - PREDICTED: uncharacterized protein LOC104784782 isoform X2 [Camelina sativa]

Gene co-expression network

sample Hb_040153_010 Hb_040153_010 Hb_075745_020 Hb_075745_020 Hb_040153_010--Hb_075745_020 Hb_003750_060 Hb_003750_060 Hb_040153_010--Hb_003750_060 Hb_000487_420 Hb_000487_420 Hb_040153_010--Hb_000487_420 Hb_004079_120 Hb_004079_120 Hb_040153_010--Hb_004079_120 Hb_002739_130 Hb_002739_130 Hb_040153_010--Hb_002739_130 Hb_011918_050 Hb_011918_050 Hb_040153_010--Hb_011918_050 Hb_005332_020 Hb_005332_020 Hb_075745_020--Hb_005332_020 Hb_001799_050 Hb_001799_050 Hb_075745_020--Hb_001799_050 Hb_002701_150 Hb_002701_150 Hb_075745_020--Hb_002701_150 Hb_002045_150 Hb_002045_150 Hb_075745_020--Hb_002045_150 Hb_032202_110 Hb_032202_110 Hb_075745_020--Hb_032202_110 Hb_000160_350 Hb_000160_350 Hb_075745_020--Hb_000160_350 Hb_002027_060 Hb_002027_060 Hb_003750_060--Hb_002027_060 Hb_000236_470 Hb_000236_470 Hb_003750_060--Hb_000236_470 Hb_003750_060--Hb_002701_150 Hb_005333_160 Hb_005333_160 Hb_003750_060--Hb_005333_160 Hb_003943_020 Hb_003943_020 Hb_003750_060--Hb_003943_020 Hb_002890_120 Hb_002890_120 Hb_003750_060--Hb_002890_120 Hb_000640_310 Hb_000640_310 Hb_000487_420--Hb_000640_310 Hb_000487_420--Hb_001799_050 Hb_027760_080 Hb_027760_080 Hb_000487_420--Hb_027760_080 Hb_000487_420--Hb_002045_150 Hb_140049_030 Hb_140049_030 Hb_000487_420--Hb_140049_030 Hb_000487_420--Hb_000160_350 Hb_000963_130 Hb_000963_130 Hb_004079_120--Hb_000963_130 Hb_004079_120--Hb_002739_130 Hb_006452_160 Hb_006452_160 Hb_004079_120--Hb_006452_160 Hb_000077_010 Hb_000077_010 Hb_004079_120--Hb_000077_010 Hb_000156_160 Hb_000156_160 Hb_004079_120--Hb_000156_160 Hb_016734_090 Hb_016734_090 Hb_004079_120--Hb_016734_090 Hb_002739_130--Hb_006452_160 Hb_002739_130--Hb_016734_090 Hb_000563_330 Hb_000563_330 Hb_002739_130--Hb_000563_330 Hb_000661_020 Hb_000661_020 Hb_002739_130--Hb_000661_020 Hb_002739_130--Hb_011918_050 Hb_000679_340 Hb_000679_340 Hb_002739_130--Hb_000679_340 Hb_011918_050--Hb_016734_090 Hb_001269_200 Hb_001269_200 Hb_011918_050--Hb_001269_200 Hb_000023_320 Hb_000023_320 Hb_011918_050--Hb_000023_320 Hb_005288_080 Hb_005288_080 Hb_011918_050--Hb_005288_080 Hb_005054_190 Hb_005054_190 Hb_011918_050--Hb_005054_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.418885 0.481921 0.357953 0.0419624 0.368664 0.345995
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0590618 0.371569 0 0.206124 0.282359

CAGE analysis