Hb_040718_010

Information

Type -
Description -
Location Contig40718: 117-3223
Sequence    

Annotation

kegg
ID mus:103982461
description beta-glucosidase 18-like
nr
ID XP_012071272.1
description PREDICTED: beta-glucosidase 18-like [Jatropha curcas]
swissprot
ID Q7XSK0
description Beta-glucosidase 18 OS=Oryza sativa subsp. japonica GN=BGLU18 PE=3 SV=2
trembl
ID A0A067L5J5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01141 PE=3 SV=1
Gene Ontology
ID GO:0016023
description beta-glucosidase 18-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_40332: 2324-3229
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_040718_010 0.0 - - PREDICTED: beta-glucosidase 18-like [Jatropha curcas]
2 Hb_006938_060 0.0612030537 - - nutrient reservoir, putative [Ricinus communis]
3 Hb_005050_030 0.0874220365 - - PREDICTED: wall-associated receptor kinase 2-like [Jatropha curcas]
4 Hb_001369_460 0.0968461303 - - vacuolar invertase [Manihot esculenta]
5 Hb_002151_150 0.0972654415 - - PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
6 Hb_174168_010 0.0986217715 - - hypothetical protein JCGZ_06105 [Jatropha curcas]
7 Hb_000947_010 0.1143588966 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA4 [Jatropha curcas]
8 Hb_176680_010 0.1191890492 - - hypothetical protein JCGZ_22787 [Jatropha curcas]
9 Hb_005622_030 0.1363874896 - - transferase, putative [Ricinus communis]
10 Hb_001409_080 0.1431434193 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2 isoform X1 [Populus euphratica]
11 Hb_000866_060 0.1433219978 - - putative glycerol-3-phosphate acyltransferase [Vernicia fordii]
12 Hb_003043_130 0.144520978 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor CRF2-like [Jatropha curcas]
13 Hb_010678_010 0.1539945038 - - PREDICTED: alpha-glucosidase-like [Jatropha curcas]
14 Hb_006916_130 0.1544354072 - - PREDICTED: cytochrome P450 85A [Jatropha curcas]
15 Hb_004837_250 0.1548396765 - - conserved hypothetical protein [Ricinus communis]
16 Hb_007520_050 0.1549474857 transcription factor TF Family: MYB PREDICTED: transcription factor WER-like [Jatropha curcas]
17 Hb_006267_040 0.1564430582 - - PREDICTED: ABC transporter G family member 32 isoform X1 [Jatropha curcas]
18 Hb_005181_190 0.1569881742 - - PREDICTED: uncharacterized protein LOC105643550 [Jatropha curcas]
19 Hb_002701_170 0.1577294976 - - PREDICTED: cytochrome P450 85A [Jatropha curcas]
20 Hb_017043_040 0.1587479752 - - Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_040718_010 Hb_040718_010 Hb_006938_060 Hb_006938_060 Hb_040718_010--Hb_006938_060 Hb_005050_030 Hb_005050_030 Hb_040718_010--Hb_005050_030 Hb_001369_460 Hb_001369_460 Hb_040718_010--Hb_001369_460 Hb_002151_150 Hb_002151_150 Hb_040718_010--Hb_002151_150 Hb_174168_010 Hb_174168_010 Hb_040718_010--Hb_174168_010 Hb_000947_010 Hb_000947_010 Hb_040718_010--Hb_000947_010 Hb_176680_010 Hb_176680_010 Hb_006938_060--Hb_176680_010 Hb_001409_080 Hb_001409_080 Hb_006938_060--Hb_001409_080 Hb_006938_060--Hb_174168_010 Hb_000866_060 Hb_000866_060 Hb_006938_060--Hb_000866_060 Hb_006267_040 Hb_006267_040 Hb_006938_060--Hb_006267_040 Hb_005050_030--Hb_002151_150 Hb_000365_440 Hb_000365_440 Hb_005050_030--Hb_000365_440 Hb_002701_170 Hb_002701_170 Hb_005050_030--Hb_002701_170 Hb_005050_030--Hb_000947_010 Hb_009693_010 Hb_009693_010 Hb_005050_030--Hb_009693_010 Hb_001369_460--Hb_174168_010 Hb_007520_050 Hb_007520_050 Hb_001369_460--Hb_007520_050 Hb_001369_460--Hb_000947_010 Hb_001369_460--Hb_006938_060 Hb_003043_130 Hb_003043_130 Hb_001369_460--Hb_003043_130 Hb_002151_150--Hb_002701_170 Hb_002151_150--Hb_000365_440 Hb_000560_060 Hb_000560_060 Hb_002151_150--Hb_000560_060 Hb_006789_020 Hb_006789_020 Hb_002151_150--Hb_006789_020 Hb_174168_010--Hb_007520_050 Hb_174168_010--Hb_000947_010 Hb_174168_010--Hb_003043_130 Hb_002391_030 Hb_002391_030 Hb_174168_010--Hb_002391_030 Hb_000947_010--Hb_003043_130 Hb_005575_010 Hb_005575_010 Hb_000947_010--Hb_005575_010 Hb_005181_190 Hb_005181_190 Hb_000947_010--Hb_005181_190 Hb_067558_010 Hb_067558_010 Hb_000947_010--Hb_067558_010 Hb_000947_010--Hb_000866_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0755155 0.0215609 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0201133 0.0526444

CAGE analysis