Hb_040963_010

Information

Type -
Description -
Location Contig40963: 3688-5308
Sequence    

Annotation

kegg
ID rcu:RCOM_0603110
description Polyneuridine-aldehyde esterase precursor, putative (EC:3.1.1.78)
nr
ID XP_011039242.1
description PREDICTED: polyneuridine-aldehyde esterase-like [Populus euphratica]
swissprot
ID O80477
description Methylesterase 3 OS=Arabidopsis thaliana GN=MES3 PE=2 SV=1
trembl
ID U5G8D6
description Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s11750g PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_040963_010 0.0 - - PREDICTED: polyneuridine-aldehyde esterase-like [Populus euphratica]
2 Hb_148121_030 0.0972925964 - - PREDICTED: zinc-finger homeodomain protein 14 [Gossypium raimondii]
3 Hb_000149_120 0.1035006074 - - PREDICTED: uncharacterized protein LOC105642119 isoform X2 [Jatropha curcas]
4 Hb_005618_110 0.1169940423 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
5 Hb_001388_020 0.1243023146 - - PREDICTED: F-box/kelch-repeat protein SKIP20 [Jatropha curcas]
6 Hb_002928_220 0.1385854874 - - serine/threonine-protein kinase cx32, putative [Ricinus communis]
7 Hb_002740_170 0.1412683887 - - PREDICTED: uncharacterized protein LOC105647357 [Jatropha curcas]
8 Hb_000254_150 0.148908312 - - PREDICTED: homeobox-leucine zipper protein GLABRA 2 [Jatropha curcas]
9 Hb_001538_040 0.1519653497 - - PREDICTED: uncharacterized protein LOC104228304 [Nicotiana sylvestris]
10 Hb_006120_020 0.1536512913 - - -
11 Hb_136546_010 0.1592248486 - - PREDICTED: wall-associated receptor kinase-like 1, partial [Populus euphratica]
12 Hb_007382_070 0.1616040921 - - PREDICTED: MAPK-interacting and spindle-stabilizing protein-like [Jatropha curcas]
13 Hb_002542_090 0.1654094367 - - Potassium transporter, putative [Ricinus communis]
14 Hb_002811_330 0.1738138244 - - PREDICTED: calmodulin-like protein 11 [Jatropha curcas]
15 Hb_001427_220 0.1780372559 - - hypothetical protein CISIN_1g033375mg [Citrus sinensis]
16 Hb_006569_110 0.1805492764 - - conserved hypothetical protein [Ricinus communis]
17 Hb_006938_010 0.1807867247 transcription factor TF Family: MYB PREDICTED: transcription factor MYB3-like [Jatropha curcas]
18 Hb_107809_010 0.1808315373 - - JHL06P13.14 [Jatropha curcas]
19 Hb_000203_060 0.1848361664 transcription factor TF Family: G2-like hypothetical protein POPTR_0004s05660g [Populus trichocarpa]
20 Hb_000521_360 0.1864532057 - - PREDICTED: beta-glucosidase 17-like [Jatropha curcas]

Gene co-expression network

sample Hb_040963_010 Hb_040963_010 Hb_148121_030 Hb_148121_030 Hb_040963_010--Hb_148121_030 Hb_000149_120 Hb_000149_120 Hb_040963_010--Hb_000149_120 Hb_005618_110 Hb_005618_110 Hb_040963_010--Hb_005618_110 Hb_001388_020 Hb_001388_020 Hb_040963_010--Hb_001388_020 Hb_002928_220 Hb_002928_220 Hb_040963_010--Hb_002928_220 Hb_002740_170 Hb_002740_170 Hb_040963_010--Hb_002740_170 Hb_120268_010 Hb_120268_010 Hb_148121_030--Hb_120268_010 Hb_148121_030--Hb_001388_020 Hb_148121_030--Hb_005618_110 Hb_000203_060 Hb_000203_060 Hb_148121_030--Hb_000203_060 Hb_148121_030--Hb_002740_170 Hb_006120_020 Hb_006120_020 Hb_000149_120--Hb_006120_020 Hb_000149_120--Hb_002928_220 Hb_007382_070 Hb_007382_070 Hb_000149_120--Hb_007382_070 Hb_024570_020 Hb_024570_020 Hb_000149_120--Hb_024570_020 Hb_006970_100 Hb_006970_100 Hb_000149_120--Hb_006970_100 Hb_000254_150 Hb_000254_150 Hb_005618_110--Hb_000254_150 Hb_005618_110--Hb_000149_120 Hb_032299_070 Hb_032299_070 Hb_005618_110--Hb_032299_070 Hb_005618_110--Hb_002740_170 Hb_001427_220 Hb_001427_220 Hb_001388_020--Hb_001427_220 Hb_013786_010 Hb_013786_010 Hb_001388_020--Hb_013786_010 Hb_136546_010 Hb_136546_010 Hb_001388_020--Hb_136546_010 Hb_107809_010 Hb_107809_010 Hb_001388_020--Hb_107809_010 Hb_002928_220--Hb_006970_100 Hb_006569_110 Hb_006569_110 Hb_002928_220--Hb_006569_110 Hb_009486_100 Hb_009486_100 Hb_002928_220--Hb_009486_100 Hb_002542_090 Hb_002542_090 Hb_002928_220--Hb_002542_090 Hb_006938_010 Hb_006938_010 Hb_002928_220--Hb_006938_010 Hb_003878_100 Hb_003878_100 Hb_002740_170--Hb_003878_100 Hb_002740_170--Hb_000254_150 Hb_001675_130 Hb_001675_130 Hb_002740_170--Hb_001675_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.694097 0.379362 0.0137664 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.3138 0.604174

CAGE analysis