Hb_041139_010

Information

Type -
Description -
Location Contig41139: 24-1351
Sequence    

Annotation

kegg
ID pop:POPTR_0011s03490g
description hypothetical protein
nr
ID XP_012091436.1
description PREDICTED: probable terpene synthase 13 [Jatropha curcas]
swissprot
ID B9RXW4
description Probable terpene synthase 13 OS=Ricinus communis GN=TPS13 PE=3 SV=1
trembl
ID A0A067JDK5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21304 PE=4 SV=1
Gene Ontology
ID GO:0000287
description ( )-nerolidol synthase 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_041139_010 0.0 - - PREDICTED: probable terpene synthase 13 [Jatropha curcas]
2 Hb_008253_050 0.0546574805 transcription factor TF Family: MYB hypothetical protein POPTR_0001s36220g [Populus trichocarpa]
3 Hb_011618_010 0.0648819422 - - PREDICTED: probable receptor-like protein kinase At5g59700 [Jatropha curcas]
4 Hb_008441_010 0.0876506362 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
5 Hb_002001_030 0.0941423962 - - Plasma membrane ATPase 4 [Gossypium arboreum]
6 Hb_001894_100 0.0974399274 - - PREDICTED: kininogen-1-like [Jatropha curcas]
7 Hb_172426_070 0.0975414114 - - PREDICTED: BAG family molecular chaperone regulator 3-like isoform X1 [Jatropha curcas]
8 Hb_000139_360 0.0984721552 - - PREDICTED: uncharacterized protein LOC105631933 [Jatropha curcas]
9 Hb_001104_220 0.0990401204 - - PREDICTED: uncharacterized protein LOC105629453 [Jatropha curcas]
10 Hb_001384_040 0.1010732255 - - PREDICTED: beta-glucosidase 17-like [Jatropha curcas]
11 Hb_001491_070 0.1086789613 - - PREDICTED: probable beta-1,3-galactosyltransferase 17 isoform X1 [Jatropha curcas]
12 Hb_003163_010 0.1153161729 - - hypothetical protein POPTR_0012s02920g [Populus trichocarpa]
13 Hb_000477_090 0.1192832059 - - PREDICTED: uncharacterized protein LOC105639302 [Jatropha curcas]
14 Hb_005348_050 0.1218969356 - - beta-galactosidase, putative [Ricinus communis]
15 Hb_005539_150 0.1255199052 - - PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 33 [Jatropha curcas]
16 Hb_113379_010 0.1257014375 - - PREDICTED: beta-xylosidase/alpha-L-arabinofuranosidase 1 [Jatropha curcas]
17 Hb_000941_110 0.1289070869 - - Serine/threonine-protein kinase PBS1, putative [Ricinus communis]
18 Hb_000696_060 0.1313479029 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000654_020 0.1318899145 - - hypothetical protein CICLE_v10006262mg [Citrus clementina]
20 Hb_002073_130 0.1324239624 - - PREDICTED: uncharacterized protein LOC100246830 [Vitis vinifera]

Gene co-expression network

sample Hb_041139_010 Hb_041139_010 Hb_008253_050 Hb_008253_050 Hb_041139_010--Hb_008253_050 Hb_011618_010 Hb_011618_010 Hb_041139_010--Hb_011618_010 Hb_008441_010 Hb_008441_010 Hb_041139_010--Hb_008441_010 Hb_002001_030 Hb_002001_030 Hb_041139_010--Hb_002001_030 Hb_001894_100 Hb_001894_100 Hb_041139_010--Hb_001894_100 Hb_172426_070 Hb_172426_070 Hb_041139_010--Hb_172426_070 Hb_008253_050--Hb_011618_010 Hb_008253_050--Hb_001894_100 Hb_005348_050 Hb_005348_050 Hb_008253_050--Hb_005348_050 Hb_000223_090 Hb_000223_090 Hb_008253_050--Hb_000223_090 Hb_005539_150 Hb_005539_150 Hb_008253_050--Hb_005539_150 Hb_001384_040 Hb_001384_040 Hb_011618_010--Hb_001384_040 Hb_011618_010--Hb_005348_050 Hb_011618_010--Hb_001894_100 Hb_000589_410 Hb_000589_410 Hb_011618_010--Hb_000589_410 Hb_000809_010 Hb_000809_010 Hb_008441_010--Hb_000809_010 Hb_000654_020 Hb_000654_020 Hb_008441_010--Hb_000654_020 Hb_008441_010--Hb_008253_050 Hb_001104_220 Hb_001104_220 Hb_008441_010--Hb_001104_220 Hb_002073_130 Hb_002073_130 Hb_008441_010--Hb_002073_130 Hb_005018_010 Hb_005018_010 Hb_002001_030--Hb_005018_010 Hb_001491_070 Hb_001491_070 Hb_002001_030--Hb_001491_070 Hb_002001_030--Hb_172426_070 Hb_000621_030 Hb_000621_030 Hb_002001_030--Hb_000621_030 Hb_002001_030--Hb_001384_040 Hb_001790_060 Hb_001790_060 Hb_001894_100--Hb_001790_060 Hb_001894_100--Hb_005348_050 Hb_001894_100--Hb_000223_090 Hb_133076_010 Hb_133076_010 Hb_001894_100--Hb_133076_010 Hb_003151_020 Hb_003151_020 Hb_001894_100--Hb_003151_020 Hb_003163_010 Hb_003163_010 Hb_172426_070--Hb_003163_010 Hb_006831_090 Hb_006831_090 Hb_172426_070--Hb_006831_090 Hb_172426_070--Hb_001491_070 Hb_002600_170 Hb_002600_170 Hb_172426_070--Hb_002600_170 Hb_004032_280 Hb_004032_280 Hb_172426_070--Hb_004032_280 Hb_008536_020 Hb_008536_020 Hb_172426_070--Hb_008536_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.211673 0.279336 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.050114 0.489011

CAGE analysis