Hb_041201_010

Information

Type -
Description -
Location Contig41201: 1894-2354
Sequence    

Annotation

kegg
ID pop:POPTR_0001s36930g
description POPTRDRAFT_838516; hypothetical protein
nr
ID XP_012070922.1
description PREDICTED: putative BPI/LBP family protein At1g04970 [Jatropha curcas]
swissprot
ID Q9MAU5
description Putative BPI/LBP family protein At1g04970 OS=Arabidopsis thaliana GN=At1g04970 PE=2 SV=1
trembl
ID A0A067L574
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00961 PE=4 SV=1
Gene Ontology
ID GO:0005615
description bpi lbp family protein at1g04970

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_041201_010 0.0 - - PREDICTED: putative BPI/LBP family protein At1g04970 [Jatropha curcas]
2 Hb_000365_050 0.1425027693 - - -
3 Hb_111051_010 0.1524074078 - - Disease resistance protein RGA2, putative [Ricinus communis]
4 Hb_001969_080 0.1713137873 - - PREDICTED: uncharacterized protein LOC105634921 [Jatropha curcas]
5 Hb_001157_200 0.1763138599 - - PREDICTED: uncharacterized protein LOC105645131 [Jatropha curcas]
6 Hb_000792_040 0.1810590937 - - PREDICTED: steroid 5-alpha-reductase DET2 [Jatropha curcas]
7 Hb_000429_050 0.1814629533 - - PREDICTED: serine/threonine-protein kinase Nek6 isoform X2 [Jatropha curcas]
8 Hb_117038_010 0.1848617722 - - cysteine protease [Hevea brasiliensis]
9 Hb_028872_110 0.1861419682 - - PREDICTED: uncharacterized protein LOC105644776 [Jatropha curcas]
10 Hb_006573_210 0.1874488843 - - PREDICTED: protein SGT1 homolog [Jatropha curcas]
11 Hb_004994_090 0.1878943438 - - PREDICTED: uncharacterized protein LOC105643033 isoform X2 [Jatropha curcas]
12 Hb_132880_040 0.188024596 - - PREDICTED: protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1-like isoform X2 [Jatropha curcas]
13 Hb_013057_020 0.1883768221 - - PREDICTED: E3 ubiquitin-protein ligase RLIM-like [Jatropha curcas]
14 Hb_003092_060 0.1885771046 - - calcineurin-like phosphoesterase [Manihot esculenta]
15 Hb_005550_010 0.1910997266 - - PREDICTED: 3-ketoacyl-CoA synthase 4-like [Jatropha curcas]
16 Hb_003055_040 0.1942869158 - - PREDICTED: secretory carrier-associated membrane protein 3-like isoform X1 [Jatropha curcas]
17 Hb_008246_020 0.1943173568 - - amidophosphoribosyltransferase, putative [Ricinus communis]
18 Hb_083799_010 0.1945942502 - - ubiquitin-protein ligase, putative [Ricinus communis]
19 Hb_000302_200 0.1950571944 - - ornithine cyclodeaminase, putative [Ricinus communis]
20 Hb_000155_110 0.1957497787 - - Auxin response factor, putative [Ricinus communis]

Gene co-expression network

sample Hb_041201_010 Hb_041201_010 Hb_000365_050 Hb_000365_050 Hb_041201_010--Hb_000365_050 Hb_111051_010 Hb_111051_010 Hb_041201_010--Hb_111051_010 Hb_001969_080 Hb_001969_080 Hb_041201_010--Hb_001969_080 Hb_001157_200 Hb_001157_200 Hb_041201_010--Hb_001157_200 Hb_000792_040 Hb_000792_040 Hb_041201_010--Hb_000792_040 Hb_000429_050 Hb_000429_050 Hb_041201_010--Hb_000429_050 Hb_011794_080 Hb_011794_080 Hb_000365_050--Hb_011794_080 Hb_004668_090 Hb_004668_090 Hb_000365_050--Hb_004668_090 Hb_132880_040 Hb_132880_040 Hb_000365_050--Hb_132880_040 Hb_002675_140 Hb_002675_140 Hb_000365_050--Hb_002675_140 Hb_000115_150 Hb_000115_150 Hb_000365_050--Hb_000115_150 Hb_000365_050--Hb_001157_200 Hb_005550_010 Hb_005550_010 Hb_111051_010--Hb_005550_010 Hb_000120_230 Hb_000120_230 Hb_111051_010--Hb_000120_230 Hb_008468_030 Hb_008468_030 Hb_111051_010--Hb_008468_030 Hb_006441_020 Hb_006441_020 Hb_111051_010--Hb_006441_020 Hb_013057_020 Hb_013057_020 Hb_111051_010--Hb_013057_020 Hb_000538_230 Hb_000538_230 Hb_001969_080--Hb_000538_230 Hb_000215_320 Hb_000215_320 Hb_001969_080--Hb_000215_320 Hb_003373_030 Hb_003373_030 Hb_001969_080--Hb_003373_030 Hb_001377_510 Hb_001377_510 Hb_001969_080--Hb_001377_510 Hb_028487_140 Hb_028487_140 Hb_001969_080--Hb_028487_140 Hb_000106_140 Hb_000106_140 Hb_001969_080--Hb_000106_140 Hb_001157_200--Hb_132880_040 Hb_003544_030 Hb_003544_030 Hb_001157_200--Hb_003544_030 Hb_007747_080 Hb_007747_080 Hb_001157_200--Hb_007747_080 Hb_000984_170 Hb_000984_170 Hb_001157_200--Hb_000984_170 Hb_006452_120 Hb_006452_120 Hb_001157_200--Hb_006452_120 Hb_005663_110 Hb_005663_110 Hb_001157_200--Hb_005663_110 Hb_000302_200 Hb_000302_200 Hb_000792_040--Hb_000302_200 Hb_185830_070 Hb_185830_070 Hb_000792_040--Hb_185830_070 Hb_004450_070 Hb_004450_070 Hb_000792_040--Hb_004450_070 Hb_007576_200 Hb_007576_200 Hb_000792_040--Hb_007576_200 Hb_006501_160 Hb_006501_160 Hb_000792_040--Hb_006501_160 Hb_008246_020 Hb_008246_020 Hb_000792_040--Hb_008246_020 Hb_000359_090 Hb_000359_090 Hb_000429_050--Hb_000359_090 Hb_012651_010 Hb_012651_010 Hb_000429_050--Hb_012651_010 Hb_000028_600 Hb_000028_600 Hb_000429_050--Hb_000028_600 Hb_002781_030 Hb_002781_030 Hb_000429_050--Hb_002781_030 Hb_001014_210 Hb_001014_210 Hb_000429_050--Hb_001014_210 Hb_000258_240 Hb_000258_240 Hb_000429_050--Hb_000258_240
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.69304 2.50384 0.232156 3.53262 1.21687 1.0878
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.76231 0.678022 0.665804 2.52341 0.976762

CAGE analysis