Hb_041692_010

Information

Type -
Description -
Location Contig41692: 3148-4963
Sequence    

Annotation

kegg
ID pop:POPTR_0005s07740g
description POPTRDRAFT_818283; annexin-like protein RJ4
nr
ID AJJ90387.1
description annexin [Manihot esculenta]
swissprot
ID Q9XEE2
description Annexin D2 OS=Arabidopsis thaliana GN=ANN2 PE=1 SV=1
trembl
ID A0A0C4ZQZ2
description Ann1 protein OS=Manihot esculenta GN=Ann1 PE=2 SV=1
Gene Ontology
ID GO:0043167
description annexin d2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_41209: 4048-4177
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_041692_010 0.0 - - annexin [Manihot esculenta]
2 Hb_000748_120 0.1009744035 transcription factor TF Family: MIKC PREDICTED: agamous-like MADS-box protein AGL1 [Jatropha curcas]
3 Hb_051663_010 0.1161641024 - - receptor-kinase, putative [Ricinus communis]
4 Hb_001516_010 0.1169840116 - - PREDICTED: guanylate kinase 2 [Jatropha curcas]
5 Hb_000347_100 0.1217429627 transcription factor TF Family: C3H hypothetical protein RCOM_0684740 [Ricinus communis]
6 Hb_001541_130 0.1222225564 - - GDSL esterase/lipase [Morus notabilis]
7 Hb_008725_090 0.1227267464 - - PREDICTED: uncharacterized protein LOC105642581 [Jatropha curcas]
8 Hb_003702_060 0.1231346758 - - PREDICTED: protein trichome birefringence-like 38 [Jatropha curcas]
9 Hb_006816_250 0.1272702927 - - PREDICTED: uncharacterized protein LOC105647444 [Jatropha curcas]
10 Hb_004696_010 0.1329761294 - - PREDICTED: probable receptor-like serine/threonine-protein kinase At4g34500 [Jatropha curcas]
11 Hb_003835_080 0.1342008015 - - PREDICTED: receptor-like cytosolic serine/threonine-protein kinase RBK1 isoform X2 [Jatropha curcas]
12 Hb_000032_610 0.1346637389 - - PREDICTED: 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic-like [Jatropha curcas]
13 Hb_000392_260 0.1359847489 - - PREDICTED: microtubule-associated protein RP/EB family member 1B [Jatropha curcas]
14 Hb_019613_030 0.1360370405 transcription factor TF Family: SET PREDICTED: histone-lysine N-methyltransferase CLF [Jatropha curcas]
15 Hb_000816_240 0.1362412949 - - PREDICTED: phosphoglucan phosphatase LSF2, chloroplastic [Jatropha curcas]
16 Hb_005725_240 0.1364233424 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH74 isoform X1 [Jatropha curcas]
17 Hb_103474_010 0.1394960101 - - serine/threonine protein kinase, putative [Ricinus communis]
18 Hb_001095_020 0.1405216581 - - PREDICTED: F-box protein At2g26850-like [Jatropha curcas]
19 Hb_005976_110 0.1410790626 - - PREDICTED: uncharacterized protein LOC105639708 [Jatropha curcas]
20 Hb_009767_060 0.1422015967 - - PREDICTED: probable serine/threonine-protein kinase WNK9 [Jatropha curcas]

Gene co-expression network

sample Hb_041692_010 Hb_041692_010 Hb_000748_120 Hb_000748_120 Hb_041692_010--Hb_000748_120 Hb_051663_010 Hb_051663_010 Hb_041692_010--Hb_051663_010 Hb_001516_010 Hb_001516_010 Hb_041692_010--Hb_001516_010 Hb_000347_100 Hb_000347_100 Hb_041692_010--Hb_000347_100 Hb_001541_130 Hb_001541_130 Hb_041692_010--Hb_001541_130 Hb_008725_090 Hb_008725_090 Hb_041692_010--Hb_008725_090 Hb_000748_120--Hb_051663_010 Hb_000847_130 Hb_000847_130 Hb_000748_120--Hb_000847_130 Hb_005976_110 Hb_005976_110 Hb_000748_120--Hb_005976_110 Hb_007617_010 Hb_007617_010 Hb_000748_120--Hb_007617_010 Hb_001817_040 Hb_001817_040 Hb_000748_120--Hb_001817_040 Hb_051663_010--Hb_001516_010 Hb_000000_390 Hb_000000_390 Hb_051663_010--Hb_000000_390 Hb_111985_100 Hb_111985_100 Hb_051663_010--Hb_111985_100 Hb_000922_200 Hb_000922_200 Hb_051663_010--Hb_000922_200 Hb_032920_020 Hb_032920_020 Hb_051663_010--Hb_032920_020 Hb_009486_050 Hb_009486_050 Hb_051663_010--Hb_009486_050 Hb_001079_060 Hb_001079_060 Hb_001516_010--Hb_001079_060 Hb_001516_010--Hb_111985_100 Hb_002835_310 Hb_002835_310 Hb_001516_010--Hb_002835_310 Hb_003938_230 Hb_003938_230 Hb_001516_010--Hb_003938_230 Hb_001514_030 Hb_001514_030 Hb_001516_010--Hb_001514_030 Hb_009767_060 Hb_009767_060 Hb_000347_100--Hb_009767_060 Hb_003580_050 Hb_003580_050 Hb_000347_100--Hb_003580_050 Hb_116647_010 Hb_116647_010 Hb_000347_100--Hb_116647_010 Hb_000416_090 Hb_000416_090 Hb_000347_100--Hb_000416_090 Hb_029639_030 Hb_029639_030 Hb_000347_100--Hb_029639_030 Hb_001095_020 Hb_001095_020 Hb_001541_130--Hb_001095_020 Hb_002572_040 Hb_002572_040 Hb_001541_130--Hb_002572_040 Hb_001541_130--Hb_111985_100 Hb_002150_090 Hb_002150_090 Hb_001541_130--Hb_002150_090 Hb_007811_020 Hb_007811_020 Hb_001541_130--Hb_007811_020 Hb_004435_020 Hb_004435_020 Hb_001541_130--Hb_004435_020 Hb_074197_030 Hb_074197_030 Hb_008725_090--Hb_074197_030 Hb_015141_010 Hb_015141_010 Hb_008725_090--Hb_015141_010 Hb_000392_260 Hb_000392_260 Hb_008725_090--Hb_000392_260 Hb_000352_280 Hb_000352_280 Hb_008725_090--Hb_000352_280 Hb_000032_610 Hb_000032_610 Hb_008725_090--Hb_000032_610
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.207646 0.375653 7.68943 7.65329 0 0.0190178
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.20635 0.0973899 0.30173 1.49591 7.11583

CAGE analysis