Hb_041769_010

Information

Type -
Description -
Location Contig41769: 2-319
Sequence    

Annotation

kegg
ID rcu:RCOM_0885330
description lipid binding protein, putative
nr
ID KDP40971.1
description hypothetical protein JCGZ_24970 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KXM6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24970 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_041769_010 0.0 - - hypothetical protein JCGZ_24970 [Jatropha curcas]
2 Hb_006446_060 0.0568322426 - - PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 isoform X1 [Populus euphratica]
3 Hb_000101_050 0.060645012 - - Metalloendoproteinase 1 precursor, putative [Ricinus communis]
4 Hb_161393_010 0.0655872088 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
5 Hb_059162_010 0.0695300454 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
6 Hb_001621_140 0.0721497664 - - PREDICTED: glycerol-3-phosphate acyltransferase 5 [Jatropha curcas]
7 Hb_004185_040 0.078531085 - - polygalacturonase, putative [Ricinus communis]
8 Hb_001173_050 0.0854341316 - - DUF26 domain-containing protein 2 precursor, putative [Ricinus communis]
9 Hb_004195_040 0.0854694637 - - salicylic acid methyl transferase [Capsicum annuum]
10 Hb_005731_080 0.0857656299 - - Anthranilate N-benzoyltransferase protein, putative [Ricinus communis]
11 Hb_002311_050 0.0919963627 - - PREDICTED: uncharacterized protein LOC105122837 isoform X2 [Populus euphratica]
12 Hb_047163_010 0.0933187994 - - PREDICTED: periaxin-like [Populus euphratica]
13 Hb_000813_120 0.0944216696 - - PREDICTED: serine carboxypeptidase-like 18 [Tarenaya hassleriana]
14 Hb_005653_020 0.094989294 transcription factor TF Family: C2H2 TRANSPARENT TESTA 1 protein, putative [Ricinus communis]
15 Hb_012019_030 0.0985458193 - - hypothetical protein POPTR_0005s23360g [Populus trichocarpa]
16 Hb_005993_070 0.1023196237 - - lipid binding protein, putative [Ricinus communis]
17 Hb_002234_150 0.1027286621 - - (S)-N-methylcoclaurine 3'-hydroxylase isozyme, putative [Ricinus communis]
18 Hb_002553_120 0.1028898573 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor 1B [Jatropha curcas]
19 Hb_011628_030 0.106056586 - - conserved hypothetical protein [Ricinus communis]
20 Hb_011856_010 0.1062491409 - - cytochrome P450, putative [Ricinus communis]

Gene co-expression network

sample Hb_041769_010 Hb_041769_010 Hb_006446_060 Hb_006446_060 Hb_041769_010--Hb_006446_060 Hb_000101_050 Hb_000101_050 Hb_041769_010--Hb_000101_050 Hb_161393_010 Hb_161393_010 Hb_041769_010--Hb_161393_010 Hb_059162_010 Hb_059162_010 Hb_041769_010--Hb_059162_010 Hb_001621_140 Hb_001621_140 Hb_041769_010--Hb_001621_140 Hb_004185_040 Hb_004185_040 Hb_041769_010--Hb_004185_040 Hb_006446_060--Hb_000101_050 Hb_006446_060--Hb_001621_140 Hb_005993_070 Hb_005993_070 Hb_006446_060--Hb_005993_070 Hb_006446_060--Hb_161393_010 Hb_005653_020 Hb_005653_020 Hb_006446_060--Hb_005653_020 Hb_001902_180 Hb_001902_180 Hb_000101_050--Hb_001902_180 Hb_000101_050--Hb_005993_070 Hb_005731_080 Hb_005731_080 Hb_000101_050--Hb_005731_080 Hb_000101_050--Hb_059162_010 Hb_002081_040 Hb_002081_040 Hb_161393_010--Hb_002081_040 Hb_161393_010--Hb_001621_140 Hb_161393_010--Hb_005653_020 Hb_002553_120 Hb_002553_120 Hb_161393_010--Hb_002553_120 Hb_047163_010 Hb_047163_010 Hb_059162_010--Hb_047163_010 Hb_011628_030 Hb_011628_030 Hb_059162_010--Hb_011628_030 Hb_059162_010--Hb_004185_040 Hb_002743_030 Hb_002743_030 Hb_059162_010--Hb_002743_030 Hb_004195_040 Hb_004195_040 Hb_059162_010--Hb_004195_040 Hb_001621_140--Hb_005653_020 Hb_001621_140--Hb_002081_040 Hb_003074_070 Hb_003074_070 Hb_001621_140--Hb_003074_070 Hb_004185_040--Hb_004195_040 Hb_012019_030 Hb_012019_030 Hb_004185_040--Hb_012019_030 Hb_001173_050 Hb_001173_050 Hb_004185_040--Hb_001173_050 Hb_011856_010 Hb_011856_010 Hb_004185_040--Hb_011856_010 Hb_139460_010 Hb_139460_010 Hb_004185_040--Hb_139460_010 Hb_000813_120 Hb_000813_120 Hb_004185_040--Hb_000813_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 26.7163 2.1048 4.14912 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 86.5229 0.814477

CAGE analysis