Hb_042491_010

Information

Type -
Description -
Location Contig42491: 147-1328
Sequence    

Annotation

kegg
ID pvu:PHAVU_004G0480000
description hypothetical protein
nr
ID BAJ53233.1
description JHL06P13.14 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID E6NUC3
description JHL06P13.14 protein OS=Jatropha curcas GN=JHL06P13.14 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_042491_010 0.0 - - JHL06P13.14 [Jatropha curcas]
2 Hb_036176_010 0.1290113081 - - hypothetical protein CISIN_1g002055mg [Citrus sinensis]
3 Hb_038718_010 0.1307128174 - - Disease resistance protein RFL1, putative [Ricinus communis]
4 Hb_004218_220 0.1408964705 - - o-methyltransferase, putative [Ricinus communis]
5 Hb_000189_070 0.1435236784 transcription factor TF Family: AUX/IAA Auxin-induced protein 22D, putative [Ricinus communis]
6 Hb_011206_050 0.1456795652 - - hypothetical protein POPTR_0011s02840g [Populus trichocarpa]
7 Hb_033053_020 0.1477600047 - - hypothetical protein JCGZ_01204 [Jatropha curcas]
8 Hb_009627_020 0.1492796714 - - PREDICTED: probable pectinesterase/pectinesterase inhibitor 34 [Jatropha curcas]
9 Hb_000172_310 0.1500051622 - - PREDICTED: fasciclin-like arabinogalactan protein 21 [Jatropha curcas]
10 Hb_004659_100 0.1506397785 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000692_030 0.1554262982 - - nucleoredoxin, putative [Ricinus communis]
12 Hb_002035_020 0.1573936568 transcription factor TF Family: TRAF hypothetical protein B456_011G050200 [Gossypium raimondii]
13 Hb_002894_040 0.1583687352 - - conserved hypothetical protein [Ricinus communis]
14 Hb_002044_110 0.1634781381 - - PREDICTED: probable carboxylesterase 5 isoform X1 [Populus euphratica]
15 Hb_008959_050 0.1638875619 transcription factor TF Family: Orphans PREDICTED: late secretory pathway protein AVL9-like isoform X2 [Jatropha curcas]
16 Hb_004631_100 0.164876945 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH96 [Jatropha curcas]
17 Hb_000128_090 0.1663011123 - - Reticuline oxidase precursor, putative [Ricinus communis]
18 Hb_002897_030 0.1707281147 - - PREDICTED: methylesterase 17 [Jatropha curcas]
19 Hb_001277_420 0.1713142027 - - PREDICTED: protein lin-12-like isoform X2 [Populus euphratica]
20 Hb_000866_320 0.1736897454 - - receptor protein kinase, putative [Ricinus communis]

Gene co-expression network

sample Hb_042491_010 Hb_042491_010 Hb_036176_010 Hb_036176_010 Hb_042491_010--Hb_036176_010 Hb_038718_010 Hb_038718_010 Hb_042491_010--Hb_038718_010 Hb_004218_220 Hb_004218_220 Hb_042491_010--Hb_004218_220 Hb_000189_070 Hb_000189_070 Hb_042491_010--Hb_000189_070 Hb_011206_050 Hb_011206_050 Hb_042491_010--Hb_011206_050 Hb_033053_020 Hb_033053_020 Hb_042491_010--Hb_033053_020 Hb_036176_010--Hb_011206_050 Hb_002044_110 Hb_002044_110 Hb_036176_010--Hb_002044_110 Hb_036176_010--Hb_000189_070 Hb_002217_210 Hb_002217_210 Hb_036176_010--Hb_002217_210 Hb_005144_100 Hb_005144_100 Hb_036176_010--Hb_005144_100 Hb_000128_090 Hb_000128_090 Hb_038718_010--Hb_000128_090 Hb_010642_010 Hb_010642_010 Hb_038718_010--Hb_010642_010 Hb_002035_020 Hb_002035_020 Hb_038718_010--Hb_002035_020 Hb_170632_010 Hb_170632_010 Hb_038718_010--Hb_170632_010 Hb_011355_020 Hb_011355_020 Hb_038718_010--Hb_011355_020 Hb_038718_010--Hb_033053_020 Hb_000172_310 Hb_000172_310 Hb_004218_220--Hb_000172_310 Hb_004218_220--Hb_002044_110 Hb_002894_040 Hb_002894_040 Hb_004218_220--Hb_002894_040 Hb_008959_050 Hb_008959_050 Hb_004218_220--Hb_008959_050 Hb_055147_020 Hb_055147_020 Hb_004218_220--Hb_055147_020 Hb_004218_220--Hb_011206_050 Hb_003647_040 Hb_003647_040 Hb_000189_070--Hb_003647_040 Hb_000189_070--Hb_033053_020 Hb_012727_010 Hb_012727_010 Hb_000189_070--Hb_012727_010 Hb_032050_070 Hb_032050_070 Hb_000189_070--Hb_032050_070 Hb_000566_170 Hb_000566_170 Hb_011206_050--Hb_000566_170 Hb_011206_050--Hb_002044_110 Hb_000510_210 Hb_000510_210 Hb_011206_050--Hb_000510_210 Hb_000975_130 Hb_000975_130 Hb_011206_050--Hb_000975_130 Hb_000956_060 Hb_000956_060 Hb_011206_050--Hb_000956_060 Hb_004659_100 Hb_004659_100 Hb_033053_020--Hb_004659_100 Hb_087427_010 Hb_087427_010 Hb_033053_020--Hb_087427_010 Hb_004631_100 Hb_004631_100 Hb_033053_020--Hb_004631_100 Hb_000631_100 Hb_000631_100 Hb_033053_020--Hb_000631_100 Hb_008021_040 Hb_008021_040 Hb_033053_020--Hb_008021_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.149334 4.14766 3.12141 8.76172 0.097408 0.0421057
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.322253 3.26063 0.119111

CAGE analysis