Hb_044026_010

Information

Type -
Description -
Location Contig44026: 1-1411
Sequence    

Annotation

kegg
ID tcc:TCM_024852
description Cytochrome P450 93A3
nr
ID XP_012087731.1
description PREDICTED: cytochrome P450 93A3-like [Jatropha curcas]
swissprot
ID Q42798
description 3,9-dihydroxypterocarpan 6A-monooxygenase OS=Glycine max GN=CYP93A1 PE=1 SV=1
trembl
ID A0A067JYH4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25505 PE=3 SV=1
Gene Ontology
ID GO:0005506
description cytochrome p450 93a3-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_42610: 913-1174
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_044026_010 0.0 - - PREDICTED: cytochrome P450 93A3-like [Jatropha curcas]
2 Hb_001405_260 0.0661019013 - - E3 ubiquitin ligase PUB14, putative [Ricinus communis]
3 Hb_110048_010 0.0837153775 - - PREDICTED: uncharacterized protein LOC104887199 [Beta vulgaris subsp. vulgaris]
4 Hb_000333_150 0.0869725565 - - hypothetical protein RCOM_0711500 [Ricinus communis]
5 Hb_004157_080 0.0904941382 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein ZAT12 [Jatropha curcas]
6 Hb_005648_030 0.0943814417 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH18-like [Jatropha curcas]
7 Hb_111908_010 0.0949376929 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
8 Hb_004117_360 0.0961659338 - - hypothetical protein JCGZ_00367 [Jatropha curcas]
9 Hb_078477_010 0.0996946078 - - LRR receptor-like serine/threonine-protein kinase, putative [Theobroma cacao]
10 Hb_022630_010 0.1047506588 transcription factor TF Family: ERF DNA binding protein, putative [Ricinus communis]
11 Hb_005643_020 0.1091832091 - - PREDICTED: U-box domain-containing protein 44-like [Jatropha curcas]
12 Hb_001514_110 0.1123782268 - - conserved hypothetical protein [Ricinus communis]
13 Hb_011111_010 0.1132574948 - - PREDICTED: putative RING-H2 finger protein ATL21A [Jatropha curcas]
14 Hb_002193_050 0.1133635295 - - PREDICTED: cytochrome P450 93A1-like [Citrus sinensis]
15 Hb_005946_190 0.1185053792 - - hypothetical protein EUGRSUZ_C01051 [Eucalyptus grandis]
16 Hb_189242_010 0.1210899199 - - hypothetical protein B456_013G0075002, partial [Gossypium raimondii]
17 Hb_005725_180 0.1231032692 - - -
18 Hb_004994_070 0.1251785886 - - PREDICTED: BON1-associated protein 2 [Jatropha curcas]
19 Hb_005588_010 0.1254239389 - - PREDICTED: patatin-like protein 2 [Jatropha curcas]
20 Hb_005843_070 0.1257431868 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF109-like [Jatropha curcas]

Gene co-expression network

sample Hb_044026_010 Hb_044026_010 Hb_001405_260 Hb_001405_260 Hb_044026_010--Hb_001405_260 Hb_110048_010 Hb_110048_010 Hb_044026_010--Hb_110048_010 Hb_000333_150 Hb_000333_150 Hb_044026_010--Hb_000333_150 Hb_004157_080 Hb_004157_080 Hb_044026_010--Hb_004157_080 Hb_005648_030 Hb_005648_030 Hb_044026_010--Hb_005648_030 Hb_111908_010 Hb_111908_010 Hb_044026_010--Hb_111908_010 Hb_001405_260--Hb_005648_030 Hb_005643_020 Hb_005643_020 Hb_001405_260--Hb_005643_020 Hb_005588_010 Hb_005588_010 Hb_001405_260--Hb_005588_010 Hb_078477_010 Hb_078477_010 Hb_001405_260--Hb_078477_010 Hb_022630_010 Hb_022630_010 Hb_001405_260--Hb_022630_010 Hb_110048_010--Hb_111908_010 Hb_000002_130 Hb_000002_130 Hb_110048_010--Hb_000002_130 Hb_110562_020 Hb_110562_020 Hb_110048_010--Hb_110562_020 Hb_000172_730 Hb_000172_730 Hb_110048_010--Hb_000172_730 Hb_000926_170 Hb_000926_170 Hb_110048_010--Hb_000926_170 Hb_008978_010 Hb_008978_010 Hb_000333_150--Hb_008978_010 Hb_004994_070 Hb_004994_070 Hb_000333_150--Hb_004994_070 Hb_000959_290 Hb_000959_290 Hb_000333_150--Hb_000959_290 Hb_000333_150--Hb_078477_010 Hb_093204_010 Hb_093204_010 Hb_000333_150--Hb_093204_010 Hb_005946_190 Hb_005946_190 Hb_004157_080--Hb_005946_190 Hb_004117_360 Hb_004117_360 Hb_004157_080--Hb_004117_360 Hb_004157_080--Hb_111908_010 Hb_001514_110 Hb_001514_110 Hb_004157_080--Hb_001514_110 Hb_005725_180 Hb_005725_180 Hb_004157_080--Hb_005725_180 Hb_005648_030--Hb_078477_010 Hb_005648_030--Hb_022630_010 Hb_005648_030--Hb_005588_010 Hb_033153_010 Hb_033153_010 Hb_005648_030--Hb_033153_010 Hb_111908_010--Hb_004117_360 Hb_111908_010--Hb_001514_110 Hb_111908_010--Hb_005725_180 Hb_012691_040 Hb_012691_040 Hb_111908_010--Hb_012691_040 Hb_005843_070 Hb_005843_070 Hb_111908_010--Hb_005843_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 10.2734 0.676705 0.251833 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0373904 0 0.0901096 0

CAGE analysis