Hb_044653_010

Information

Type -
Description -
Location Contig44653: 4085-5474
Sequence    

Annotation

kegg
ID rcu:RCOM_0535350
description GTP-binding protein era, putative
nr
ID XP_012092761.1
description PREDICTED: GTPase Era, mitochondrial [Jatropha curcas]
swissprot
ID Q0WRX3
description Serine carboxypeptidase-like 40 OS=Arabidopsis thaliana GN=SCPL40 PE=2 SV=2
trembl
ID A0A067L852
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22179 PE=3 SV=1
Gene Ontology
ID GO:0008233
description gtp-binding protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_044653_010 0.0 - - PREDICTED: GTPase Era, mitochondrial [Jatropha curcas]
2 Hb_001506_030 0.1275041631 - - DNA (cytosine-5)-methyltransferase, putative [Ricinus communis]
3 Hb_125948_010 0.2159509457 - - heat-shock protein, putative [Ricinus communis]
4 Hb_000122_060 0.2189883521 - - PREDICTED: protein LURP-one-related 14 [Jatropha curcas]
5 Hb_163400_010 0.244621244 - - PREDICTED: uncharacterized protein LOC105631661 [Jatropha curcas]
6 Hb_070541_030 0.2853802985 - - -
7 Hb_014361_050 0.2917687741 - - PREDICTED: uncharacterized protein ycf36 isoform X1 [Jatropha curcas]
8 Hb_186304_010 0.2921159251 - - PREDICTED: non-lysosomal glucosylceramidase [Jatropha curcas]
9 Hb_002984_020 0.295400465 - - hypothetical protein EUGRSUZ_J02661 [Eucalyptus grandis]
10 Hb_082945_020 0.3071835303 - - PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Jatropha curcas]
11 Hb_001950_020 0.3088229822 - - Phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN, putative [Ricinus communis]
12 Hb_003438_060 0.3097233252 - - -
13 Hb_000836_100 0.317974751 - - conserved hypothetical protein [Ricinus communis]
14 Hb_076233_020 0.3184955982 transcription factor TF Family: C2H2 PREDICTED: dnaJ homolog subfamily C member 21 [Populus euphratica]
15 Hb_011164_010 0.3221102185 - - cytosolic class II low molecular weight heat shock protein [Prunus dulcis]
16 Hb_008221_130 0.3224402038 - - hypothetical protein VITISV_016971 [Vitis vinifera]
17 Hb_002039_050 0.3247866826 - - PREDICTED: U-box domain-containing protein 40 [Jatropha curcas]
18 Hb_000997_010 0.3252472513 - - PREDICTED: FHA domain-containing protein At4g14490 isoform X2 [Jatropha curcas]
19 Hb_135569_010 0.3278241621 - - PREDICTED: uncharacterized protein LOC105108579 [Populus euphratica]
20 Hb_002374_330 0.3286144729 - - -

Gene co-expression network

sample Hb_044653_010 Hb_044653_010 Hb_001506_030 Hb_001506_030 Hb_044653_010--Hb_001506_030 Hb_125948_010 Hb_125948_010 Hb_044653_010--Hb_125948_010 Hb_000122_060 Hb_000122_060 Hb_044653_010--Hb_000122_060 Hb_163400_010 Hb_163400_010 Hb_044653_010--Hb_163400_010 Hb_070541_030 Hb_070541_030 Hb_044653_010--Hb_070541_030 Hb_014361_050 Hb_014361_050 Hb_044653_010--Hb_014361_050 Hb_001506_030--Hb_163400_010 Hb_186304_010 Hb_186304_010 Hb_001506_030--Hb_186304_010 Hb_076233_020 Hb_076233_020 Hb_001506_030--Hb_076233_020 Hb_001506_030--Hb_000122_060 Hb_001506_030--Hb_014361_050 Hb_125948_010--Hb_000122_060 Hb_002984_020 Hb_002984_020 Hb_125948_010--Hb_002984_020 Hb_002039_050 Hb_002039_050 Hb_125948_010--Hb_002039_050 Hb_002431_010 Hb_002431_010 Hb_125948_010--Hb_002431_010 Hb_001103_070 Hb_001103_070 Hb_125948_010--Hb_001103_070 Hb_000122_060--Hb_002039_050 Hb_111876_010 Hb_111876_010 Hb_000122_060--Hb_111876_010 Hb_003438_060 Hb_003438_060 Hb_000122_060--Hb_003438_060 Hb_053073_010 Hb_053073_010 Hb_163400_010--Hb_053073_010 Hb_163400_010--Hb_186304_010 Hb_163400_010--Hb_002984_020 Hb_068307_010 Hb_068307_010 Hb_163400_010--Hb_068307_010 Hb_004611_060 Hb_004611_060 Hb_070541_030--Hb_004611_060 Hb_070541_030--Hb_001103_070 Hb_145317_010 Hb_145317_010 Hb_070541_030--Hb_145317_010 Hb_000732_240 Hb_000732_240 Hb_070541_030--Hb_000732_240 Hb_035761_010 Hb_035761_010 Hb_070541_030--Hb_035761_010 Hb_070541_030--Hb_186304_010 Hb_000997_010 Hb_000997_010 Hb_014361_050--Hb_000997_010 Hb_015928_020 Hb_015928_020 Hb_014361_050--Hb_015928_020 Hb_061466_020 Hb_061466_020 Hb_014361_050--Hb_061466_020 Hb_014361_050--Hb_076233_020 Hb_006286_010 Hb_006286_010 Hb_014361_050--Hb_006286_010 Hb_055339_010 Hb_055339_010 Hb_014361_050--Hb_055339_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.323996 0.157889 0.267752 0.269292 0.172954
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis