Hb_044662_040

Information

Type -
Description -
Location Contig44662: 19454-21502
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_044662_040 0.0 - - -
2 Hb_002851_060 0.0886109927 - - Clathrin light chain 2 -like protein [Gossypium arboreum]
3 Hb_004607_120 0.0892508475 - - PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 8 [Jatropha curcas]
4 Hb_004502_030 0.0955266221 - - unknown [Populus trichocarpa]
5 Hb_005271_070 0.0973622852 - - PREDICTED: RNA-binding protein NOB1 [Jatropha curcas]
6 Hb_007632_250 0.1058271426 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000977_140 0.1090171943 - - PREDICTED: uncharacterized protein LOC105801335 [Gossypium raimondii]
8 Hb_004374_010 0.1113059098 - - PREDICTED: PIN2/TERF1-interacting telomerase inhibitor 1 [Jatropha curcas]
9 Hb_171554_090 0.1162696568 - - PREDICTED: 10 kDa chaperonin [Jatropha curcas]
10 Hb_000258_410 0.116848544 - - PREDICTED: uncharacterized protein LOC105630409 [Jatropha curcas]
11 Hb_178345_010 0.1172289131 - - hypothetical protein PHAVU_004G084200g [Phaseolus vulgaris]
12 Hb_009801_010 0.1204099279 - - ATPase inhibitor, putative [Ricinus communis]
13 Hb_001956_120 0.1204362094 - - conserved hypothetical protein [Ricinus communis]
14 Hb_006501_150 0.1215047037 - - conserved hypothetical protein [Ricinus communis]
15 Hb_001514_020 0.1218376726 - - PREDICTED: protein DCL, chloroplastic-like [Jatropha curcas]
16 Hb_011537_040 0.122926427 - - PREDICTED: uncharacterized protein LOC105646229 [Jatropha curcas]
17 Hb_007992_030 0.1229346674 transcription factor TF Family: GNAT PREDICTED: uncharacterized protein LOC105646951 [Jatropha curcas]
18 Hb_003633_130 0.1232309968 - - PREDICTED: uncharacterized protein LOC105647466 [Jatropha curcas]
19 Hb_004096_170 0.1241378202 - - PREDICTED: uncharacterized protein DDB_G0275933 [Jatropha curcas]
20 Hb_003911_040 0.1259060089 - - PREDICTED: putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 [Jatropha curcas]

Gene co-expression network

sample Hb_044662_040 Hb_044662_040 Hb_002851_060 Hb_002851_060 Hb_044662_040--Hb_002851_060 Hb_004607_120 Hb_004607_120 Hb_044662_040--Hb_004607_120 Hb_004502_030 Hb_004502_030 Hb_044662_040--Hb_004502_030 Hb_005271_070 Hb_005271_070 Hb_044662_040--Hb_005271_070 Hb_007632_250 Hb_007632_250 Hb_044662_040--Hb_007632_250 Hb_000977_140 Hb_000977_140 Hb_044662_040--Hb_000977_140 Hb_011537_040 Hb_011537_040 Hb_002851_060--Hb_011537_040 Hb_004374_010 Hb_004374_010 Hb_002851_060--Hb_004374_010 Hb_017098_030 Hb_017098_030 Hb_002851_060--Hb_017098_030 Hb_002851_060--Hb_005271_070 Hb_178345_010 Hb_178345_010 Hb_002851_060--Hb_178345_010 Hb_002863_010 Hb_002863_010 Hb_004607_120--Hb_002863_010 Hb_004607_120--Hb_004502_030 Hb_004607_120--Hb_007632_250 Hb_002235_150 Hb_002235_150 Hb_004607_120--Hb_002235_150 Hb_000622_100 Hb_000622_100 Hb_004607_120--Hb_000622_100 Hb_000847_070 Hb_000847_070 Hb_004502_030--Hb_000847_070 Hb_007992_030 Hb_007992_030 Hb_004502_030--Hb_007992_030 Hb_001514_020 Hb_001514_020 Hb_004502_030--Hb_001514_020 Hb_004096_170 Hb_004096_170 Hb_004502_030--Hb_004096_170 Hb_000345_560 Hb_000345_560 Hb_004502_030--Hb_000345_560 Hb_003633_130 Hb_003633_130 Hb_004502_030--Hb_003633_130 Hb_005271_070--Hb_011537_040 Hb_000258_410 Hb_000258_410 Hb_005271_070--Hb_000258_410 Hb_164010_020 Hb_164010_020 Hb_005271_070--Hb_164010_020 Hb_005741_020 Hb_005741_020 Hb_005271_070--Hb_005741_020 Hb_000500_290 Hb_000500_290 Hb_005271_070--Hb_000500_290 Hb_005271_070--Hb_004374_010 Hb_000617_320 Hb_000617_320 Hb_007632_250--Hb_000617_320 Hb_003911_040 Hb_003911_040 Hb_007632_250--Hb_003911_040 Hb_119583_010 Hb_119583_010 Hb_007632_250--Hb_119583_010 Hb_007632_250--Hb_004502_030 Hb_027892_060 Hb_027892_060 Hb_007632_250--Hb_027892_060 Hb_017895_050 Hb_017895_050 Hb_007632_250--Hb_017895_050 Hb_000977_140--Hb_007992_030 Hb_000977_140--Hb_178345_010 Hb_000183_070 Hb_000183_070 Hb_000977_140--Hb_000183_070 Hb_001437_300 Hb_001437_300 Hb_000977_140--Hb_001437_300 Hb_000038_130 Hb_000038_130 Hb_000977_140--Hb_000038_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
11.0841 2.08576 1.84283 0.691477 13.0354 13.6399
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
9.97114 8.28479 1.36436 1.7374 0.756118

CAGE analysis