Hb_045786_010

Information

Type -
Description -
Location Contig45786: 1-408
Sequence    

Annotation

kegg
ID rcu:RCOM_0574900
description receptor serine/threonine kinase, putative
nr
ID XP_012066189.1
description PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
swissprot
ID Q3ECH2
description Probable receptor-like protein kinase At1g67000 OS=Arabidopsis thaliana GN=At1g67000 PE=2 SV=2
trembl
ID A0A067LFF5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23766 PE=4 SV=1
Gene Ontology
ID GO:0000166
description probable receptor-like protein kinase at1g67000

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_045786_010 0.0 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
2 Hb_000579_210 0.0897027468 - - PREDICTED: omega-hydroxypalmitate O-feruloyl transferase [Jatropha curcas]
3 Hb_009851_040 0.1153701562 - - conserved hypothetical protein [Ricinus communis]
4 Hb_000628_060 0.1252798754 - - PREDICTED: calmodulin-like protein 5 [Solanum lycopersicum]
5 Hb_000628_100 0.1299394074 - - hypothetical protein MTR_1g019660 [Medicago truncatula]
6 Hb_008196_010 0.131210559 - - unnamed protein product [Coffea canephora]
7 Hb_000270_790 0.1338135069 - - hypothetical protein JCGZ_11498 [Jatropha curcas]
8 Hb_074100_010 0.1365281106 - - hypothetical protein JCGZ_23768 [Jatropha curcas]
9 Hb_001766_140 0.1390333167 - - hypothetical protein JCGZ_18656 [Jatropha curcas]
10 Hb_006187_020 0.1403140723 - - PREDICTED: WAT1-related protein At5g07050-like [Populus euphratica]
11 Hb_005695_050 0.1418283348 - - PREDICTED: sulfate transporter 1.3-like [Jatropha curcas]
12 Hb_009851_120 0.1476426378 - - PREDICTED: RING-H2 zinc finger protein RHA4a [Jatropha curcas]
13 Hb_001502_010 0.1490080322 - - hypothetical protein JCGZ_04288 [Jatropha curcas]
14 Hb_010261_050 0.1499999473 - - DNA binding protein, putative [Ricinus communis]
15 Hb_000429_080 0.1500812514 - - conserved hypothetical protein [Ricinus communis]
16 Hb_002025_190 0.1515868426 - - PREDICTED: transcription factor bHLH111 [Jatropha curcas]
17 Hb_008200_010 0.1518391043 - - PREDICTED: ABC transporter G family member 14-like isoform X1 [Jatropha curcas]
18 Hb_002783_210 0.1520686803 - - PREDICTED: uncharacterized protein LOC105635341 [Jatropha curcas]
19 Hb_002053_020 0.1524834565 - - PREDICTED: MATE efflux family protein DTX1 [Jatropha curcas]
20 Hb_001006_130 0.1526214314 - - PREDICTED: transcription factor bHLH111 [Jatropha curcas]

Gene co-expression network

sample Hb_045786_010 Hb_045786_010 Hb_000579_210 Hb_000579_210 Hb_045786_010--Hb_000579_210 Hb_009851_040 Hb_009851_040 Hb_045786_010--Hb_009851_040 Hb_000628_060 Hb_000628_060 Hb_045786_010--Hb_000628_060 Hb_000628_100 Hb_000628_100 Hb_045786_010--Hb_000628_100 Hb_008196_010 Hb_008196_010 Hb_045786_010--Hb_008196_010 Hb_000270_790 Hb_000270_790 Hb_045786_010--Hb_000270_790 Hb_000188_140 Hb_000188_140 Hb_000579_210--Hb_000188_140 Hb_000186_090 Hb_000186_090 Hb_000579_210--Hb_000186_090 Hb_000579_210--Hb_000628_060 Hb_074100_010 Hb_074100_010 Hb_000579_210--Hb_074100_010 Hb_029508_040 Hb_029508_040 Hb_000579_210--Hb_029508_040 Hb_005001_010 Hb_005001_010 Hb_009851_040--Hb_005001_010 Hb_009851_040--Hb_000628_100 Hb_000172_150 Hb_000172_150 Hb_009851_040--Hb_000172_150 Hb_001502_010 Hb_001502_010 Hb_009851_040--Hb_001502_010 Hb_020805_160 Hb_020805_160 Hb_009851_040--Hb_020805_160 Hb_003777_150 Hb_003777_150 Hb_000628_060--Hb_003777_150 Hb_004474_020 Hb_004474_020 Hb_000628_060--Hb_004474_020 Hb_081228_010 Hb_081228_010 Hb_000628_060--Hb_081228_010 Hb_084304_010 Hb_084304_010 Hb_000628_060--Hb_084304_010 Hb_004970_100 Hb_004970_100 Hb_000628_060--Hb_004970_100 Hb_002025_190 Hb_002025_190 Hb_000628_100--Hb_002025_190 Hb_000999_060 Hb_000999_060 Hb_000628_100--Hb_000999_060 Hb_000164_250 Hb_000164_250 Hb_000628_100--Hb_000164_250 Hb_003777_100 Hb_003777_100 Hb_000628_100--Hb_003777_100 Hb_005695_050 Hb_005695_050 Hb_000628_100--Hb_005695_050 Hb_009851_120 Hb_009851_120 Hb_000628_100--Hb_009851_120 Hb_007125_020 Hb_007125_020 Hb_008196_010--Hb_007125_020 Hb_104362_020 Hb_104362_020 Hb_008196_010--Hb_104362_020 Hb_179367_010 Hb_179367_010 Hb_008196_010--Hb_179367_010 Hb_151027_010 Hb_151027_010 Hb_008196_010--Hb_151027_010 Hb_002014_120 Hb_002014_120 Hb_008196_010--Hb_002014_120 Hb_000174_130 Hb_000174_130 Hb_008196_010--Hb_000174_130 Hb_000011_260 Hb_000011_260 Hb_000270_790--Hb_000011_260 Hb_000270_790--Hb_000628_060 Hb_000270_790--Hb_000188_140 Hb_000270_790--Hb_084304_010 Hb_001418_050 Hb_001418_050 Hb_000270_790--Hb_001418_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.397597 4.29641 2.04207 18.1977 0.16404 0.221153
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.064345 0.266668

CAGE analysis