Hb_045810_010

Information

Type -
Description -
Location Contig45810: 2127-5123
Sequence    

Annotation

kegg
ID rcu:RCOM_0687660
description laccase, putative (EC:1.10.3.3)
nr
ID XP_012086656.1
description PREDICTED: laccase-12-like [Jatropha curcas]
swissprot
ID Q9SIY8
description Laccase-5 OS=Arabidopsis thaliana GN=LAC5 PE=2 SV=1
trembl
ID A0A067LK62
description Laccase OS=Jatropha curcas GN=JCGZ_01194 PE=3 SV=1
Gene Ontology
ID GO:0048046
description laccase-12-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_045810_010 0.0 - - PREDICTED: laccase-12-like [Jatropha curcas]
2 Hb_007785_020 0.0501381991 desease resistance Gene Name: NB-ARC PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
3 Hb_002067_110 0.0799051748 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Populus euphratica]
4 Hb_001331_050 0.0849709687 - - hypothetical protein VITISV_022439 [Vitis vinifera]
5 Hb_006351_080 0.0954892159 - - hypothetical protein B456_011G275400 [Gossypium raimondii]
6 Hb_000844_020 0.1006625317 transcription factor TF Family: C2C2-Dof PREDICTED: dof zinc finger protein DOF1.6 [Jatropha curcas]
7 Hb_000233_060 0.1029170452 - - hypothetical protein JCGZ_14793 [Jatropha curcas]
8 Hb_005643_010 0.1039947242 transcription factor TF Family: ERF DNA binding protein, putative [Ricinus communis]
9 Hb_000035_360 0.1093206654 - - PREDICTED: VQ motif-containing protein 31-like [Jatropha curcas]
10 Hb_004586_380 0.1102641605 - - purine transporter, putative [Ricinus communis]
11 Hb_066262_020 0.1147028348 - - hypothetical protein JCGZ_14803 [Jatropha curcas]
12 Hb_005396_100 0.1176151186 - - conserved hypothetical protein [Ricinus communis]
13 Hb_150643_010 0.1176778251 - - lipid binding protein, putative [Ricinus communis]
14 Hb_064855_010 0.1220183865 - - ankyrin repeat-containing protein, putative [Ricinus communis]
15 Hb_119441_010 0.1233608846 - - hypothetical protein CISIN_1g0477971mg, partial [Citrus sinensis]
16 Hb_000128_010 0.1273329628 - - dimethylaniline monooxygenase, putative [Ricinus communis]
17 Hb_000977_160 0.1318430841 - - Serine-threonine protein kinase, plant-type, putative [Theobroma cacao]
18 Hb_000277_020 0.1319559676 - - hypothetical protein JCGZ_08656 [Jatropha curcas]
19 Hb_000796_100 0.1319742655 transcription factor TF Family: MYB r2r3-myb transcription factor, putative [Ricinus communis]
20 Hb_000532_060 0.1320217982 - - copper-transporting atpase p-type, putative [Ricinus communis]

Gene co-expression network

sample Hb_045810_010 Hb_045810_010 Hb_007785_020 Hb_007785_020 Hb_045810_010--Hb_007785_020 Hb_002067_110 Hb_002067_110 Hb_045810_010--Hb_002067_110 Hb_001331_050 Hb_001331_050 Hb_045810_010--Hb_001331_050 Hb_006351_080 Hb_006351_080 Hb_045810_010--Hb_006351_080 Hb_000844_020 Hb_000844_020 Hb_045810_010--Hb_000844_020 Hb_000233_060 Hb_000233_060 Hb_045810_010--Hb_000233_060 Hb_007785_020--Hb_002067_110 Hb_007785_020--Hb_000844_020 Hb_007785_020--Hb_001331_050 Hb_066262_020 Hb_066262_020 Hb_007785_020--Hb_066262_020 Hb_150643_010 Hb_150643_010 Hb_007785_020--Hb_150643_010 Hb_002067_110--Hb_000844_020 Hb_002067_110--Hb_066262_020 Hb_064855_010 Hb_064855_010 Hb_002067_110--Hb_064855_010 Hb_001271_040 Hb_001271_040 Hb_002067_110--Hb_001271_040 Hb_005643_010 Hb_005643_010 Hb_001331_050--Hb_005643_010 Hb_119441_010 Hb_119441_010 Hb_001331_050--Hb_119441_010 Hb_000369_150 Hb_000369_150 Hb_001331_050--Hb_000369_150 Hb_000879_100 Hb_000879_100 Hb_001331_050--Hb_000879_100 Hb_001331_050--Hb_006351_080 Hb_004586_380 Hb_004586_380 Hb_006351_080--Hb_004586_380 Hb_176149_010 Hb_176149_010 Hb_006351_080--Hb_176149_010 Hb_000128_010 Hb_000128_010 Hb_006351_080--Hb_000128_010 Hb_006351_080--Hb_119441_010 Hb_000844_020--Hb_064855_010 Hb_000844_020--Hb_001271_040 Hb_000844_020--Hb_066262_020 Hb_000796_100 Hb_000796_100 Hb_000844_020--Hb_000796_100 Hb_101778_020 Hb_101778_020 Hb_000844_020--Hb_101778_020 Hb_000035_360 Hb_000035_360 Hb_000233_060--Hb_000035_360 Hb_066262_010 Hb_066262_010 Hb_000233_060--Hb_066262_010 Hb_000233_060--Hb_001331_050 Hb_000233_060--Hb_066262_020 Hb_011924_030 Hb_011924_030 Hb_000233_060--Hb_011924_030 Hb_000233_060--Hb_002067_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 4.25639 0 0.23457 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0163354 0 0.993655 0

CAGE analysis