Hb_045870_010

Information

Type -
Description -
Location Contig45870: 1786-2257
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_045870_010 0.0 - - -
2 Hb_012395_080 0.1817268223 - - PREDICTED: pentatricopeptide repeat-containing protein At4g19890 [Jatropha curcas]
3 Hb_004884_030 0.18832716 - - PREDICTED: ammonium transporter 3 member 3 [Vitis vinifera]
4 Hb_119886_040 0.1994972493 - - -
5 Hb_004884_020 0.2013782808 - - PREDICTED: BAG family molecular chaperone regulator 4 isoform X2 [Jatropha curcas]
6 Hb_012528_030 0.2032512869 - - -
7 Hb_027380_230 0.2056497207 - - PREDICTED: CSC1-like protein ERD4 [Jatropha curcas]
8 Hb_000077_220 0.2137537822 - - PREDICTED: uncharacterized protein LOC105647046 [Jatropha curcas]
9 Hb_065379_010 0.2156071452 transcription factor TF Family: Trihelix PREDICTED: trihelix transcription factor GT-2-like [Jatropha curcas]
10 Hb_003814_030 0.2167250367 - - PREDICTED: WAT1-related protein At5g47470-like isoform X2 [Jatropha curcas]
11 Hb_000330_160 0.2171643002 - - hypothetical protein JCGZ_04462 [Jatropha curcas]
12 Hb_007481_030 0.2191528232 - - PREDICTED: uncharacterized protein LOC105628433 [Jatropha curcas]
13 Hb_000197_290 0.2195758798 - - PREDICTED: A-agglutinin anchorage subunit [Jatropha curcas]
14 Hb_008616_030 0.2218055531 transcription factor TF Family: NF-YA PREDICTED: nuclear transcription factor Y subunit A-10 isoform X1 [Jatropha curcas]
15 Hb_000505_110 0.2245713247 - - PREDICTED: pyrophosphate-energized vacuolar membrane proton pump [Jatropha curcas]
16 Hb_003914_030 0.2257788839 - - -
17 Hb_001050_030 0.2261019295 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 [Jatropha curcas]
18 Hb_008556_020 0.2284092316 - - -
19 Hb_012528_020 0.229090319 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase HSL2 [Jatropha curcas]
20 Hb_006508_030 0.2291254186 - - PREDICTED: CDPK-related kinase 1-like [Jatropha curcas]

Gene co-expression network

sample Hb_045870_010 Hb_045870_010 Hb_012395_080 Hb_012395_080 Hb_045870_010--Hb_012395_080 Hb_004884_030 Hb_004884_030 Hb_045870_010--Hb_004884_030 Hb_119886_040 Hb_119886_040 Hb_045870_010--Hb_119886_040 Hb_004884_020 Hb_004884_020 Hb_045870_010--Hb_004884_020 Hb_012528_030 Hb_012528_030 Hb_045870_010--Hb_012528_030 Hb_027380_230 Hb_027380_230 Hb_045870_010--Hb_027380_230 Hb_002370_040 Hb_002370_040 Hb_012395_080--Hb_002370_040 Hb_144550_020 Hb_144550_020 Hb_012395_080--Hb_144550_020 Hb_007481_030 Hb_007481_030 Hb_012395_080--Hb_007481_030 Hb_008616_030 Hb_008616_030 Hb_012395_080--Hb_008616_030 Hb_000136_190 Hb_000136_190 Hb_012395_080--Hb_000136_190 Hb_004884_030--Hb_027380_230 Hb_000482_150 Hb_000482_150 Hb_004884_030--Hb_000482_150 Hb_167973_010 Hb_167973_010 Hb_004884_030--Hb_167973_010 Hb_004701_050 Hb_004701_050 Hb_004884_030--Hb_004701_050 Hb_006355_020 Hb_006355_020 Hb_004884_030--Hb_006355_020 Hb_000376_060 Hb_000376_060 Hb_004884_030--Hb_000376_060 Hb_000483_180 Hb_000483_180 Hb_119886_040--Hb_000483_180 Hb_008556_020 Hb_008556_020 Hb_119886_040--Hb_008556_020 Hb_002311_230 Hb_002311_230 Hb_119886_040--Hb_002311_230 Hb_007223_010 Hb_007223_010 Hb_119886_040--Hb_007223_010 Hb_011639_010 Hb_011639_010 Hb_119886_040--Hb_011639_010 Hb_005962_010 Hb_005962_010 Hb_119886_040--Hb_005962_010 Hb_001009_100 Hb_001009_100 Hb_004884_020--Hb_001009_100 Hb_003388_030 Hb_003388_030 Hb_004884_020--Hb_003388_030 Hb_003058_020 Hb_003058_020 Hb_004884_020--Hb_003058_020 Hb_004987_070 Hb_004987_070 Hb_004884_020--Hb_004987_070 Hb_000384_080 Hb_000384_080 Hb_004884_020--Hb_000384_080 Hb_001117_160 Hb_001117_160 Hb_004884_020--Hb_001117_160 Hb_012528_020 Hb_012528_020 Hb_012528_030--Hb_012528_020 Hb_000327_080 Hb_000327_080 Hb_012528_030--Hb_000327_080 Hb_021537_010 Hb_021537_010 Hb_012528_030--Hb_021537_010 Hb_176368_010 Hb_176368_010 Hb_012528_030--Hb_176368_010 Hb_004254_100 Hb_004254_100 Hb_012528_030--Hb_004254_100 Hb_009449_090 Hb_009449_090 Hb_012528_030--Hb_009449_090 Hb_008147_050 Hb_008147_050 Hb_027380_230--Hb_008147_050 Hb_000206_120 Hb_000206_120 Hb_027380_230--Hb_000206_120 Hb_007257_010 Hb_007257_010 Hb_027380_230--Hb_007257_010 Hb_027380_230--Hb_000376_060 Hb_003376_260 Hb_003376_260 Hb_027380_230--Hb_003376_260
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.157357 0.262969 0.106666 0.103901 0.263459 0.24822
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.106944 0.231199

CAGE analysis