Hb_045941_010

Information

Type -
Description -
Location Contig45941: 935-1496
Sequence    

Annotation

kegg
ID cit:102618780
description abscisic stress-ripening protein 1-like
nr
ID XP_010056726.1
description PREDICTED: abscisic stress-ripening protein 2-like [Eucalyptus grandis]
swissprot
ID Q08655
description Abscisic stress-ripening protein 1 OS=Solanum lycopersicum GN=ASR1 PE=2 SV=1
trembl
ID A0A059C5M8
description Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E02058 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_045941_010 0.0 - - PREDICTED: abscisic stress-ripening protein 2-like [Eucalyptus grandis]
2 Hb_000185_200 0.2679479552 - - PREDICTED: protein trichome birefringence-like 42 [Jatropha curcas]
3 Hb_000408_050 0.2708778366 - - hypothetical protein POPTR_0018s11350g [Populus trichocarpa]
4 Hb_025075_010 0.2770910509 - - 50S ribosomal protein L24 [Glycine soja]
5 Hb_001220_010 0.2905532764 - - hypothetical protein JCGZ_00411 [Jatropha curcas]
6 Hb_000671_120 0.2927394351 - - hypothetical protein JCGZ_23777 [Jatropha curcas]
7 Hb_000342_160 0.2959380513 - - PREDICTED: sarcoplasmic reticulum histidine-rich calcium-binding protein [Jatropha curcas]
8 Hb_003073_140 0.2975797328 - - F-box family protein [Theobroma cacao]
9 Hb_026247_030 0.2982023994 - - PREDICTED: protein trichome birefringence-like 42 [Jatropha curcas]
10 Hb_001233_020 0.299534012 - - hypothetical protein JCGZ_04109 [Jatropha curcas]
11 Hb_080601_020 0.3031214035 - - PREDICTED: cytochrome c oxidase copper chaperone 1 [Jatropha curcas]
12 Hb_002027_330 0.3083985256 - - -
13 Hb_001163_040 0.3092792282 - - Cytochrome-c oxidases,electron carriers [Theobroma cacao]
14 Hb_001396_250 0.3135523665 - - PREDICTED: stress-associated endoplasmic reticulum protein 2 [Jatropha curcas]
15 Hb_019762_040 0.3137024093 - - conserved hypothetical protein [Ricinus communis]
16 Hb_003861_040 0.3139248883 - - hypothetical protein JCGZ_16325 [Jatropha curcas]
17 Hb_002740_010 0.3148468657 - - stress-induced hydrophobic peptide [Cleistogenes songorica]
18 Hb_000243_040 0.3149659525 - - -
19 Hb_001357_100 0.3151322509 - - PREDICTED: small ubiquitin-related modifier 1 [Jatropha curcas]
20 Hb_092272_020 0.3157762066 - - hypothetical protein EUGRSUZ_F00278 [Eucalyptus grandis]

Gene co-expression network

sample Hb_045941_010 Hb_045941_010 Hb_000185_200 Hb_000185_200 Hb_045941_010--Hb_000185_200 Hb_000408_050 Hb_000408_050 Hb_045941_010--Hb_000408_050 Hb_025075_010 Hb_025075_010 Hb_045941_010--Hb_025075_010 Hb_001220_010 Hb_001220_010 Hb_045941_010--Hb_001220_010 Hb_000671_120 Hb_000671_120 Hb_045941_010--Hb_000671_120 Hb_000342_160 Hb_000342_160 Hb_045941_010--Hb_000342_160 Hb_026247_030 Hb_026247_030 Hb_000185_200--Hb_026247_030 Hb_005167_040 Hb_005167_040 Hb_000185_200--Hb_005167_040 Hb_003919_010 Hb_003919_010 Hb_000185_200--Hb_003919_010 Hb_001696_030 Hb_001696_030 Hb_000185_200--Hb_001696_030 Hb_000185_120 Hb_000185_120 Hb_000185_200--Hb_000185_120 Hb_007766_010 Hb_007766_010 Hb_000185_200--Hb_007766_010 Hb_001486_260 Hb_001486_260 Hb_000408_050--Hb_001486_260 Hb_005463_060 Hb_005463_060 Hb_000408_050--Hb_005463_060 Hb_001158_150 Hb_001158_150 Hb_000408_050--Hb_001158_150 Hb_000484_020 Hb_000484_020 Hb_000408_050--Hb_000484_020 Hb_004102_190 Hb_004102_190 Hb_000408_050--Hb_004102_190 Hb_003226_220 Hb_003226_220 Hb_000408_050--Hb_003226_220 Hb_002740_010 Hb_002740_010 Hb_025075_010--Hb_002740_010 Hb_000240_120 Hb_000240_120 Hb_025075_010--Hb_000240_120 Hb_000562_060 Hb_000562_060 Hb_025075_010--Hb_000562_060 Hb_001163_040 Hb_001163_040 Hb_025075_010--Hb_001163_040 Hb_011512_050 Hb_011512_050 Hb_025075_010--Hb_011512_050 Hb_001233_020 Hb_001233_020 Hb_025075_010--Hb_001233_020 Hb_080601_020 Hb_080601_020 Hb_001220_010--Hb_080601_020 Hb_001220_010--Hb_001233_020 Hb_132180_010 Hb_132180_010 Hb_001220_010--Hb_132180_010 Hb_001220_010--Hb_000671_120 Hb_004669_030 Hb_004669_030 Hb_001220_010--Hb_004669_030 Hb_007894_230 Hb_007894_230 Hb_001220_010--Hb_007894_230 Hb_000671_120--Hb_004669_030 Hb_000671_120--Hb_132180_010 Hb_000671_120--Hb_000342_160 Hb_000671_120--Hb_001233_020 Hb_011037_020 Hb_011037_020 Hb_000671_120--Hb_011037_020 Hb_000635_070 Hb_000635_070 Hb_000342_160--Hb_000635_070 Hb_011214_100 Hb_011214_100 Hb_000342_160--Hb_011214_100 Hb_082006_010 Hb_082006_010 Hb_000342_160--Hb_082006_010 Hb_000125_010 Hb_000125_010 Hb_000342_160--Hb_000125_010 Hb_000342_160--Hb_004669_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.949241 0 0 1.69401 0.167524 1.01341
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.415903 1.31185 0.456121 0 0

CAGE analysis