Hb_046101_010

Information

Type -
Description -
Location Contig46101: 2-610
Sequence    

Annotation

kegg
ID rcu:RCOM_0339650
description Nodulation receptor kinase precursor, putative (EC:2.7.11.30)
nr
ID XP_012087407.1
description PREDICTED: putative serine/threonine-protein kinase-like protein CCR3 [Jatropha curcas]
swissprot
ID Q9LY50
description Putative serine/threonine-protein kinase-like protein CCR3 OS=Arabidopsis thaliana GN=CCR3 PE=2 SV=1
trembl
ID A0A067LKD0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01264 PE=4 SV=1
Gene Ontology
ID GO:0004672
description serine threonine-protein kinase-like protein ccr3

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_43732: 199-509
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_046101_010 0.0 - - PREDICTED: putative serine/threonine-protein kinase-like protein CCR3 [Jatropha curcas]
2 Hb_020285_010 0.0677533649 - - PREDICTED: putative serine/threonine-protein kinase-like protein CCR3, partial [Pyrus x bretschneideri]
3 Hb_001369_070 0.0714069189 - - unnamed protein product [Vitis vinifera]
4 Hb_074312_020 0.0781449049 - - cytochrome P450, putative [Ricinus communis]
5 Hb_002276_100 0.0886156592 - - PREDICTED: UDP-glycosyltransferase 89A2-like [Jatropha curcas]
6 Hb_001894_040 0.08999334 - - PREDICTED: carbonic anhydrase 2 isoform X1 [Jatropha curcas]
7 Hb_000280_110 0.0917673767 - - Serine/threonine-protein kinase PBS1, putative [Ricinus communis]
8 Hb_038777_010 0.0926388688 transcription factor TF Family: G2-like PREDICTED: probable transcription factor KAN2 isoform X1 [Populus euphratica]
9 Hb_009803_030 0.0928277927 - - PREDICTED: probable receptor protein kinase TMK1 [Jatropha curcas]
10 Hb_000497_100 0.0950814998 - - respiratory burst oxidase D [Manihot esculenta]
11 Hb_007894_030 0.0961119942 - - calcium-dependent protein kinase, putative [Ricinus communis]
12 Hb_075449_040 0.0977116065 - - PREDICTED: meiotic recombination protein SPO11-1 [Jatropha curcas]
13 Hb_107543_010 0.1034571591 - - Cysteine-rich RLK 10, putative [Theobroma cacao]
14 Hb_167272_010 0.1046103895 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Vitis vinifera]
15 Hb_000037_010 0.1068811942 - - PREDICTED: cation/H(+) antiporter 18-like [Jatropha curcas]
16 Hb_001636_010 0.1076799641 - - hypothetical protein JCGZ_01264 [Jatropha curcas]
17 Hb_001862_060 0.1081289978 - - PREDICTED: uncharacterized protein LOC105639802 isoform X1 [Jatropha curcas]
18 Hb_065230_010 0.1103387738 - - PREDICTED: uncharacterized protein LOC100814166 isoform X1 [Glycine max]
19 Hb_007420_010 0.1143178098 - - PREDICTED: probable receptor-like protein kinase At1g67000 isoform X2 [Jatropha curcas]
20 Hb_000085_220 0.1158341898 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_046101_010 Hb_046101_010 Hb_020285_010 Hb_020285_010 Hb_046101_010--Hb_020285_010 Hb_001369_070 Hb_001369_070 Hb_046101_010--Hb_001369_070 Hb_074312_020 Hb_074312_020 Hb_046101_010--Hb_074312_020 Hb_002276_100 Hb_002276_100 Hb_046101_010--Hb_002276_100 Hb_001894_040 Hb_001894_040 Hb_046101_010--Hb_001894_040 Hb_000280_110 Hb_000280_110 Hb_046101_010--Hb_000280_110 Hb_000497_100 Hb_000497_100 Hb_020285_010--Hb_000497_100 Hb_020285_010--Hb_001369_070 Hb_007894_030 Hb_007894_030 Hb_020285_010--Hb_007894_030 Hb_038777_010 Hb_038777_010 Hb_020285_010--Hb_038777_010 Hb_020285_010--Hb_002276_100 Hb_001369_070--Hb_007894_030 Hb_001369_070--Hb_000497_100 Hb_001369_070--Hb_074312_020 Hb_001369_070--Hb_038777_010 Hb_003439_020 Hb_003439_020 Hb_074312_020--Hb_003439_020 Hb_001862_060 Hb_001862_060 Hb_074312_020--Hb_001862_060 Hb_074312_020--Hb_002276_100 Hb_134017_010 Hb_134017_010 Hb_074312_020--Hb_134017_010 Hb_002276_100--Hb_000280_110 Hb_002276_100--Hb_038777_010 Hb_002276_100--Hb_001369_070 Hb_000085_230 Hb_000085_230 Hb_001894_040--Hb_000085_230 Hb_008226_120 Hb_008226_120 Hb_001894_040--Hb_008226_120 Hb_000579_180 Hb_000579_180 Hb_001894_040--Hb_000579_180 Hb_001894_040--Hb_001862_060 Hb_001636_010 Hb_001636_010 Hb_001894_040--Hb_001636_010 Hb_000819_010 Hb_000819_010 Hb_000280_110--Hb_000819_010 Hb_009803_030 Hb_009803_030 Hb_000280_110--Hb_009803_030 Hb_002600_010 Hb_002600_010 Hb_000280_110--Hb_002600_010 Hb_107543_010 Hb_107543_010 Hb_000280_110--Hb_107543_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 8.46347 2.60593 3.2755 0.0428311 0.0379101
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 5.78889 2.40933

CAGE analysis