Hb_046117_040

Information

Type -
Description -
Location Contig46117: 20484-25030
Sequence    

Annotation

kegg
ID rcu:RCOM_1280310
description poly [ADP-ribose] polymerase, putative (EC:1.3.1.74)
nr
ID KDP37595.1
description hypothetical protein JCGZ_07941 [Jatropha curcas]
swissprot
ID Q9SWB4
description Poly [ADP-ribose] polymerase 3 OS=Glycine max GN=PARP3 PE=2 SV=1
trembl
ID A0A067KZA9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07941 PE=4 SV=1
Gene Ontology
ID GO:0005634
description poly

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_046117_040 0.0 - - hypothetical protein JCGZ_07941 [Jatropha curcas]
2 Hb_000281_170 0.0428456437 - - polyprotein [Citrus endogenous pararetrovirus]
3 Hb_002774_130 0.0640117045 - - -
4 Hb_000117_170 0.0824457678 - - PREDICTED: uncharacterized protein LOC104088736 isoform X2 [Nicotiana tomentosiformis]
5 Hb_126907_010 0.104919809 - - -
6 Hb_150998_010 0.1130274087 - - PREDICTED: uncharacterized protein LOC105631130 [Jatropha curcas]
7 Hb_000849_110 0.1178755803 - - PREDICTED: uncharacterized protein LOC105179663 [Sesamum indicum]
8 Hb_006216_010 0.1286069141 - - PREDICTED: uncharacterized protein LOC103411650 [Malus domestica]
9 Hb_084611_010 0.1396034335 - - PREDICTED: uncharacterized protein LOC104249812 [Nicotiana sylvestris]
10 Hb_000862_020 0.1678544903 - - PREDICTED: cytochrome P450 87A3 [Jatropha curcas]
11 Hb_001687_050 0.2179780653 - - -
12 Hb_172632_020 0.2289043512 - - -
13 Hb_007194_020 0.2342722561 - - PREDICTED: uncharacterized protein LOC105641615 [Jatropha curcas]
14 Hb_003851_050 0.2519032972 - - oligopeptide transporter, putative [Ricinus communis]
15 Hb_057217_010 0.257876603 - - PREDICTED: uncharacterized protein LOC104594412 [Nelumbo nucifera]
16 Hb_001250_110 0.2599547972 transcription factor TF Family: HB hypothetical protein POPTR_0010s05340g [Populus trichocarpa]
17 Hb_058148_010 0.268667706 - - PREDICTED: uncharacterized protein LOC104216022, partial [Nicotiana sylvestris]
18 Hb_007163_140 0.268957436 transcription factor TF Family: bHLH hypothetical protein JCGZ_12606 [Jatropha curcas]
19 Hb_020581_040 0.2753947062 - - PREDICTED: inactive protein kinase SELMODRAFT_444075-like isoform X3 [Sesamum indicum]
20 Hb_003175_020 0.28071883 - - homeobox protein knotted-1, putative [Ricinus communis]

Gene co-expression network

sample Hb_046117_040 Hb_046117_040 Hb_000281_170 Hb_000281_170 Hb_046117_040--Hb_000281_170 Hb_002774_130 Hb_002774_130 Hb_046117_040--Hb_002774_130 Hb_000117_170 Hb_000117_170 Hb_046117_040--Hb_000117_170 Hb_126907_010 Hb_126907_010 Hb_046117_040--Hb_126907_010 Hb_150998_010 Hb_150998_010 Hb_046117_040--Hb_150998_010 Hb_000849_110 Hb_000849_110 Hb_046117_040--Hb_000849_110 Hb_000281_170--Hb_000117_170 Hb_000281_170--Hb_002774_130 Hb_000281_170--Hb_000849_110 Hb_000281_170--Hb_126907_010 Hb_084611_010 Hb_084611_010 Hb_000281_170--Hb_084611_010 Hb_002774_130--Hb_000117_170 Hb_002774_130--Hb_000849_110 Hb_002774_130--Hb_126907_010 Hb_002774_130--Hb_084611_010 Hb_000117_170--Hb_126907_010 Hb_000117_170--Hb_000849_110 Hb_000117_170--Hb_084611_010 Hb_126907_010--Hb_084611_010 Hb_126907_010--Hb_000849_110 Hb_126907_010--Hb_150998_010 Hb_006216_010 Hb_006216_010 Hb_150998_010--Hb_006216_010 Hb_000862_020 Hb_000862_020 Hb_150998_010--Hb_000862_020 Hb_007194_020 Hb_007194_020 Hb_150998_010--Hb_007194_020 Hb_150998_010--Hb_000281_170 Hb_000849_110--Hb_084611_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.054637 0 0 0 0.0148561
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0223871 0

CAGE analysis