Hb_046157_020

Information

Type -
Description -
Location Contig46157: 5030-7246
Sequence    

Annotation

kegg
ID rcu:RCOM_1431170
description hypothetical protein
nr
ID XP_012089088.1
description PREDICTED: uncharacterized protein LOC105647566 [Jatropha curcas]
swissprot
ID Q84K79
description Alpha-crystallin domain-containing protein 22.3 OS=Arabidopsis thaliana GN=ACD22.3 PE=1 SV=1
trembl
ID A0A067JL24
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23366 PE=4 SV=1
Gene Ontology
ID GO:0005730
description hsp1 family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_43743: 4716-7141
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_046157_020 0.0 - - PREDICTED: uncharacterized protein LOC105647566 [Jatropha curcas]
2 Hb_032717_080 0.0770854741 - - gamma-soluble nsf attachment protein, putative [Ricinus communis]
3 Hb_000840_190 0.0824021506 - - 60S ribosomal protein L10, mitochondrial, putative [Ricinus communis]
4 Hb_004204_120 0.091561132 - - PREDICTED: plant intracellular Ras-group-related LRR protein 7 [Jatropha curcas]
5 Hb_117134_010 0.0932656839 - - PREDICTED: 14 kDa zinc-binding protein isoform X1 [Jatropha curcas]
6 Hb_000317_340 0.096352969 - - conserved hypothetical protein [Ricinus communis]
7 Hb_005997_010 0.0979062636 - - Dihydroorotate dehydrogenase (quinone) [Morus notabilis]
8 Hb_070986_010 0.0980898773 - - PREDICTED: macrophage erythroblast attacher [Jatropha curcas]
9 Hb_003126_090 0.0982478205 - - Rop1 [Hevea brasiliensis]
10 Hb_005398_030 0.0983364911 - - PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase 1-like [Jatropha curcas]
11 Hb_001832_010 0.0999641802 - - PREDICTED: uncharacterized protein LOC105637890 isoform X1 [Jatropha curcas]
12 Hb_000120_750 0.0999864949 desease resistance Gene Name: NTPase_1 ATP binding protein, putative [Ricinus communis]
13 Hb_007254_040 0.1012291196 - - PREDICTED: protein MITOFERRINLIKE 1, chloroplastic [Jatropha curcas]
14 Hb_005686_110 0.1013042876 - - PREDICTED: putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Populus euphratica]
15 Hb_002105_090 0.1024638794 - - Rab4 [Hevea brasiliensis]
16 Hb_000676_290 0.1027143111 - - PREDICTED: glutaredoxin-C3 [Jatropha curcas]
17 Hb_000087_020 0.1027984097 - - PREDICTED: peptidyl-tRNA hydrolase 2, mitochondrial [Jatropha curcas]
18 Hb_000371_080 0.1028739774 - - ubiquitin-conjugating enzyme m, putative [Ricinus communis]
19 Hb_011931_050 0.1030809393 - - fk506-binding protein, putative [Ricinus communis]
20 Hb_009954_040 0.1031439094 - - PREDICTED: putative golgin subfamily A member 6-like protein 6 [Jatropha curcas]

Gene co-expression network

sample Hb_046157_020 Hb_046157_020 Hb_032717_080 Hb_032717_080 Hb_046157_020--Hb_032717_080 Hb_000840_190 Hb_000840_190 Hb_046157_020--Hb_000840_190 Hb_004204_120 Hb_004204_120 Hb_046157_020--Hb_004204_120 Hb_117134_010 Hb_117134_010 Hb_046157_020--Hb_117134_010 Hb_000317_340 Hb_000317_340 Hb_046157_020--Hb_000317_340 Hb_005997_010 Hb_005997_010 Hb_046157_020--Hb_005997_010 Hb_000103_090 Hb_000103_090 Hb_032717_080--Hb_000103_090 Hb_011310_190 Hb_011310_190 Hb_032717_080--Hb_011310_190 Hb_004048_070 Hb_004048_070 Hb_032717_080--Hb_004048_070 Hb_007254_040 Hb_007254_040 Hb_032717_080--Hb_007254_040 Hb_000613_140 Hb_000613_140 Hb_032717_080--Hb_000613_140 Hb_002105_090 Hb_002105_090 Hb_032717_080--Hb_002105_090 Hb_008695_040 Hb_008695_040 Hb_000840_190--Hb_008695_040 Hb_010883_150 Hb_010883_150 Hb_000840_190--Hb_010883_150 Hb_001421_060 Hb_001421_060 Hb_000840_190--Hb_001421_060 Hb_001824_010 Hb_001824_010 Hb_000840_190--Hb_001824_010 Hb_000086_550 Hb_000086_550 Hb_000840_190--Hb_000086_550 Hb_002685_190 Hb_002685_190 Hb_004204_120--Hb_002685_190 Hb_002030_040 Hb_002030_040 Hb_004204_120--Hb_002030_040 Hb_001235_190 Hb_001235_190 Hb_004204_120--Hb_001235_190 Hb_070986_010 Hb_070986_010 Hb_004204_120--Hb_070986_010 Hb_000120_750 Hb_000120_750 Hb_004204_120--Hb_000120_750 Hb_000798_030 Hb_000798_030 Hb_004204_120--Hb_000798_030 Hb_005398_030 Hb_005398_030 Hb_117134_010--Hb_005398_030 Hb_000496_060 Hb_000496_060 Hb_117134_010--Hb_000496_060 Hb_000061_320 Hb_000061_320 Hb_117134_010--Hb_000061_320 Hb_001833_110 Hb_001833_110 Hb_117134_010--Hb_001833_110 Hb_005432_030 Hb_005432_030 Hb_117134_010--Hb_005432_030 Hb_071130_030 Hb_071130_030 Hb_117134_010--Hb_071130_030 Hb_032202_090 Hb_032202_090 Hb_000317_340--Hb_032202_090 Hb_143629_230 Hb_143629_230 Hb_000317_340--Hb_143629_230 Hb_000365_380 Hb_000365_380 Hb_000317_340--Hb_000365_380 Hb_000545_150 Hb_000545_150 Hb_000317_340--Hb_000545_150 Hb_000465_060 Hb_000465_060 Hb_000317_340--Hb_000465_060 Hb_000317_340--Hb_000120_750 Hb_003020_230 Hb_003020_230 Hb_005997_010--Hb_003020_230 Hb_004837_140 Hb_004837_140 Hb_005997_010--Hb_004837_140 Hb_009954_040 Hb_009954_040 Hb_005997_010--Hb_009954_040 Hb_000087_020 Hb_000087_020 Hb_005997_010--Hb_000087_020 Hb_001824_070 Hb_001824_070 Hb_005997_010--Hb_001824_070 Hb_000371_080 Hb_000371_080 Hb_005997_010--Hb_000371_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
28.1785 4.92487 11.3967 18.3275 21.353 35.8259
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
66.014 43.3645 25.0993 18.0448 7.1001

CAGE analysis