Hb_046417_010

Information

Type -
Description -
Location Contig46417: 23-811
Sequence    

Annotation

kegg
ID rcu:RCOM_1481900
description kinase, putative (EC:2.7.11.30)
nr
ID XP_012088575.1
description PREDICTED: wall-associated receptor kinase-like 20 [Jatropha curcas]
swissprot
ID Q9LZM4
description Wall-associated receptor kinase-like 20 OS=Arabidopsis thaliana GN=WAKL20 PE=2 SV=1
trembl
ID A0A067LJP0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01385 PE=3 SV=1
Gene Ontology
ID GO:0030247
description wall-associated receptor kinase-like 20

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_046417_010 0.0 - - PREDICTED: wall-associated receptor kinase-like 20 [Jatropha curcas]
2 Hb_002603_030 0.2089793979 - - Nodulation receptor kinase precursor, putative [Ricinus communis]
3 Hb_002027_310 0.231464947 - - conserved hypothetical protein [Ricinus communis]
4 Hb_042083_060 0.2335655932 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g45780 [Jatropha curcas]
5 Hb_010174_140 0.2368917158 - - Alpha-L-fucosidase 2 precursor, putative [Ricinus communis]
6 Hb_111985_160 0.2446381281 - - hypothetical protein B456_010G008900 [Gossypium raimondii]
7 Hb_111985_120 0.2462730738 - - dihydroflavonol-4-reductase [Vitis rotundifolia]
8 Hb_000220_170 0.2465673477 - - -
9 Hb_000836_610 0.2473114341 - - stem-specific protein TSJT1-like [Jatropha curcas]
10 Hb_001723_070 0.2486893096 - - PREDICTED: polygalacturonase At1g48100 [Jatropha curcas]
11 Hb_001691_030 0.2488211668 - - lipoxygenase, putative [Ricinus communis]
12 Hb_009070_030 0.2505375745 - - PREDICTED: mechanosensitive ion channel protein 10 [Jatropha curcas]
13 Hb_001789_010 0.251047236 - - hypothetical protein POPTR_0015s13020g [Populus trichocarpa]
14 Hb_111693_010 0.2528471437 - - hypothetical protein JCGZ_21650 [Jatropha curcas]
15 Hb_002553_100 0.2531029604 transcription factor TF Family: ERF Ethylene-responsive transcription factor [Morus notabilis]
16 Hb_142522_030 0.2533025324 - - hypothetical protein JCGZ_21596 [Jatropha curcas]
17 Hb_006054_020 0.2539199252 - - conserved hypothetical protein [Ricinus communis]
18 Hb_003050_050 0.2543208605 - - hypothetical protein JCGZ_04619 [Jatropha curcas]
19 Hb_003025_010 0.2548282466 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 isoform X2 [Populus euphratica]
20 Hb_001579_290 0.2596071751 - - PREDICTED: polygalacturonase At1g48100 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_046417_010 Hb_046417_010 Hb_002603_030 Hb_002603_030 Hb_046417_010--Hb_002603_030 Hb_002027_310 Hb_002027_310 Hb_046417_010--Hb_002027_310 Hb_042083_060 Hb_042083_060 Hb_046417_010--Hb_042083_060 Hb_010174_140 Hb_010174_140 Hb_046417_010--Hb_010174_140 Hb_111985_160 Hb_111985_160 Hb_046417_010--Hb_111985_160 Hb_111985_120 Hb_111985_120 Hb_046417_010--Hb_111985_120 Hb_000085_290 Hb_000085_290 Hb_002603_030--Hb_000085_290 Hb_001579_290 Hb_001579_290 Hb_002603_030--Hb_001579_290 Hb_000705_090 Hb_000705_090 Hb_002603_030--Hb_000705_090 Hb_006573_260 Hb_006573_260 Hb_002603_030--Hb_006573_260 Hb_002849_090 Hb_002849_090 Hb_002603_030--Hb_002849_090 Hb_002603_030--Hb_111985_120 Hb_002376_030 Hb_002376_030 Hb_002027_310--Hb_002376_030 Hb_000220_170 Hb_000220_170 Hb_002027_310--Hb_000220_170 Hb_013652_010 Hb_013652_010 Hb_002027_310--Hb_013652_010 Hb_002374_110 Hb_002374_110 Hb_002027_310--Hb_002374_110 Hb_001723_070 Hb_001723_070 Hb_002027_310--Hb_001723_070 Hb_003050_050 Hb_003050_050 Hb_002027_310--Hb_003050_050 Hb_009070_030 Hb_009070_030 Hb_042083_060--Hb_009070_030 Hb_008554_090 Hb_008554_090 Hb_042083_060--Hb_008554_090 Hb_010598_010 Hb_010598_010 Hb_042083_060--Hb_010598_010 Hb_002110_060 Hb_002110_060 Hb_042083_060--Hb_002110_060 Hb_004525_110 Hb_004525_110 Hb_042083_060--Hb_004525_110 Hb_001454_290 Hb_001454_290 Hb_042083_060--Hb_001454_290 Hb_058526_010 Hb_058526_010 Hb_010174_140--Hb_058526_010 Hb_003166_040 Hb_003166_040 Hb_010174_140--Hb_003166_040 Hb_127743_030 Hb_127743_030 Hb_010174_140--Hb_127743_030 Hb_017491_040 Hb_017491_040 Hb_010174_140--Hb_017491_040 Hb_010174_140--Hb_000220_170 Hb_010174_140--Hb_002374_110 Hb_000029_420 Hb_000029_420 Hb_111985_160--Hb_000029_420 Hb_111693_010 Hb_111693_010 Hb_111985_160--Hb_111693_010 Hb_004055_080 Hb_004055_080 Hb_111985_160--Hb_004055_080 Hb_111985_160--Hb_111985_120 Hb_111985_160--Hb_000220_170 Hb_000815_280 Hb_000815_280 Hb_111985_160--Hb_000815_280 Hb_001789_010 Hb_001789_010 Hb_111985_120--Hb_001789_010 Hb_001377_480 Hb_001377_480 Hb_111985_120--Hb_001377_480 Hb_111985_120--Hb_111693_010 Hb_111985_120--Hb_000220_170 Hb_001101_020 Hb_001101_020 Hb_111985_120--Hb_001101_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.254274 0.572146 1.29083 0.369742 0.202046 0.026417
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.0976442 2.42954 0

CAGE analysis