Hb_046440_010

Information

Type -
Description -
Location Contig46440: 2615-3128
Sequence    

Annotation

kegg
ID pop:POPTR_0001s17380g
description POPTRDRAFT_640645; hypothetical protein
nr
ID KDP37134.1
description hypothetical protein JCGZ_06190 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KZ61
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06190 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_046440_010 0.0 - - hypothetical protein JCGZ_06190 [Jatropha curcas]
2 Hb_000943_030 0.2328858737 - - conserved hypothetical protein [Ricinus communis]
3 Hb_000415_060 0.235154151 - - PREDICTED: mitochondrial import inner membrane translocase subunit tim16 [Jatropha curcas]
4 Hb_005723_040 0.2363292995 - - PREDICTED: hippocampus abundant transcript-like protein 1 isoform X1 [Jatropha curcas]
5 Hb_002243_040 0.236468144 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_00227 [Jatropha curcas]
6 Hb_000326_030 0.2410087588 - - hypothetical protein PRUPE_ppa013909mg [Prunus persica]
7 Hb_000397_100 0.2439402559 - - hypothetical protein 31 [Hevea brasiliensis]
8 Hb_001195_390 0.2509714755 - - PREDICTED: glucan endo-1,3-beta-glucosidase 7-like [Populus euphratica]
9 Hb_170193_010 0.2541975308 - - JHL25H03.10 [Jatropha curcas]
10 Hb_003106_010 0.264760079 - - PREDICTED: microtubule-associated protein TORTIFOLIA1 [Jatropha curcas]
11 Hb_003752_050 0.2704620647 - - hypothetical protein JCGZ_15078 [Jatropha curcas]
12 Hb_001606_080 0.2705740189 - - PREDICTED: BTB/POZ domain-containing protein At2g04740 isoform X2 [Jatropha curcas]
13 Hb_000684_240 0.2734865747 - - hypothetical protein RCOM_0819620 [Ricinus communis]
14 Hb_005211_160 0.2748720498 - - Protein PNS1, putative [Ricinus communis]
15 Hb_001946_280 0.2782017541 - - conserved hypothetical protein [Ricinus communis]
16 Hb_011639_060 0.282420098 - - Oligopeptide transporter, putative [Ricinus communis]
17 Hb_013925_010 0.2840551557 - - RecName: Full=Pro-hevein; AltName: Full=Major hevein; Contains: RecName: Full=Hevein; AltName: Allergen=Hev b 6; Contains: RecName: Full=Win-like protein; Flags: Precursor [Hevea brasiliensis]
18 Hb_096346_010 0.286107698 - - unnamed protein product [Coffea canephora]
19 Hb_002326_050 0.2882621952 - - PREDICTED: uncharacterized protein LOC105633701 [Jatropha curcas]
20 Hb_000922_130 0.2884830684 - - hypothetical protein POPTR_0008s04925g [Populus trichocarpa]

Gene co-expression network

sample Hb_046440_010 Hb_046440_010 Hb_000943_030 Hb_000943_030 Hb_046440_010--Hb_000943_030 Hb_000415_060 Hb_000415_060 Hb_046440_010--Hb_000415_060 Hb_005723_040 Hb_005723_040 Hb_046440_010--Hb_005723_040 Hb_002243_040 Hb_002243_040 Hb_046440_010--Hb_002243_040 Hb_000326_030 Hb_000326_030 Hb_046440_010--Hb_000326_030 Hb_000397_100 Hb_000397_100 Hb_046440_010--Hb_000397_100 Hb_000943_030--Hb_000397_100 Hb_003106_010 Hb_003106_010 Hb_000943_030--Hb_003106_010 Hb_005211_160 Hb_005211_160 Hb_000943_030--Hb_005211_160 Hb_000031_030 Hb_000031_030 Hb_000943_030--Hb_000031_030 Hb_000258_080 Hb_000258_080 Hb_000943_030--Hb_000258_080 Hb_002326_050 Hb_002326_050 Hb_000943_030--Hb_002326_050 Hb_000028_160 Hb_000028_160 Hb_000415_060--Hb_000028_160 Hb_152079_010 Hb_152079_010 Hb_000415_060--Hb_152079_010 Hb_000347_500 Hb_000347_500 Hb_000415_060--Hb_000347_500 Hb_011030_010 Hb_011030_010 Hb_000415_060--Hb_011030_010 Hb_046931_010 Hb_046931_010 Hb_000415_060--Hb_046931_010 Hb_021420_010 Hb_021420_010 Hb_000415_060--Hb_021420_010 Hb_005723_040--Hb_000943_030 Hb_000922_130 Hb_000922_130 Hb_005723_040--Hb_000922_130 Hb_013399_080 Hb_013399_080 Hb_005723_040--Hb_013399_080 Hb_071869_010 Hb_071869_010 Hb_005723_040--Hb_071869_010 Hb_005723_040--Hb_000397_100 Hb_001195_390 Hb_001195_390 Hb_002243_040--Hb_001195_390 Hb_130788_010 Hb_130788_010 Hb_002243_040--Hb_130788_010 Hb_005470_010 Hb_005470_010 Hb_002243_040--Hb_005470_010 Hb_000160_200 Hb_000160_200 Hb_002243_040--Hb_000160_200 Hb_001946_280 Hb_001946_280 Hb_002243_040--Hb_001946_280 Hb_000326_030--Hb_000347_500 Hb_000326_030--Hb_000415_060 Hb_001749_010 Hb_001749_010 Hb_000326_030--Hb_001749_010 Hb_001606_080 Hb_001606_080 Hb_000326_030--Hb_001606_080 Hb_151628_010 Hb_151628_010 Hb_000326_030--Hb_151628_010 Hb_129722_010 Hb_129722_010 Hb_000326_030--Hb_129722_010 Hb_000397_100--Hb_005211_160 Hb_000792_090 Hb_000792_090 Hb_000397_100--Hb_000792_090 Hb_032215_050 Hb_032215_050 Hb_000397_100--Hb_032215_050 Hb_000928_020 Hb_000928_020 Hb_000397_100--Hb_000928_020 Hb_000397_100--Hb_000031_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
6.09628 0.170936 0.431225 1.5983 0.432306 4.2044
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.416526 0.327183 4.15893 1.19716 0

CAGE analysis