Hb_046610_010

Information

Type -
Description -
Location Contig46610: 17-929
Sequence    

Annotation

kegg
ID rcu:RCOM_1371710
description serine-threonine protein kinase, plant-type, putative (EC:3.1.3.16)
nr
ID XP_002531443.1
description serine-threonine protein kinase, plant-type, putative [Ricinus communis]
swissprot
ID Q9C9H7
description Receptor-like protein 12 OS=Arabidopsis thaliana GN=RLP12 PE=2 SV=2
trembl
ID B9SZM4
description Serine-threonine protein kinase, plant-type, putative OS=Ricinus communis GN=RCOM_1371710 PE=4 SV=1
Gene Ontology
ID GO:0004721
description serine-threonine protein plant-

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_046610_010 0.0 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
2 Hb_054165_010 0.0688439265 - - PREDICTED: disease resistance protein RGA2-like [Jatropha curcas]
3 Hb_164577_010 0.0714210836 - - hypothetical protein JCGZ_26658 [Jatropha curcas]
4 Hb_000997_130 0.0800126133 - - DNA binding protein, putative [Ricinus communis]
5 Hb_001002_020 0.085247782 - - ATP binding protein, putative [Ricinus communis]
6 Hb_007546_010 0.0890098096 - - unnamed protein product [Vitis vinifera]
7 Hb_021142_030 0.1032310337 - - hypothetical protein JCGZ_04974 [Jatropha curcas]
8 Hb_012400_020 0.103956108 - - Spotted leaf protein, putative [Ricinus communis]
9 Hb_006083_010 0.1041325622 transcription factor TF Family: B3 DNA binding protein, putative [Ricinus communis]
10 Hb_000277_030 0.1065879256 desease resistance Gene Name: NB-ARC hypothetical protein POPTR_0004s20690g [Populus trichocarpa]
11 Hb_005928_010 0.1093576413 - - PREDICTED: phospholipase A1-Igamma1, chloroplastic-like [Jatropha curcas]
12 Hb_001410_040 0.1144409651 - - Protein ABIL2, putative [Ricinus communis]
13 Hb_009385_010 0.1148443304 - - Cysteine/Histidine-rich C1 domain family protein, putative [Theobroma cacao]
14 Hb_002289_180 0.115089748 - - PREDICTED: probable galactinol--sucrose galactosyltransferase 2 [Nelumbo nucifera]
15 Hb_100395_010 0.1157439694 - - ankyrin repeat-containing protein, putative [Ricinus communis]
16 Hb_003847_090 0.117315422 - - PREDICTED: tyrosine decarboxylase 1-like [Jatropha curcas]
17 Hb_064885_010 0.1207567632 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA4 [Jatropha curcas]
18 Hb_008637_020 0.1226056732 - - conserved hypothetical protein [Ricinus communis]
19 Hb_002133_010 0.1240493768 - - PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 23 [Jatropha curcas]
20 Hb_173029_010 0.1273544333 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]

Gene co-expression network

sample Hb_046610_010 Hb_046610_010 Hb_054165_010 Hb_054165_010 Hb_046610_010--Hb_054165_010 Hb_164577_010 Hb_164577_010 Hb_046610_010--Hb_164577_010 Hb_000997_130 Hb_000997_130 Hb_046610_010--Hb_000997_130 Hb_001002_020 Hb_001002_020 Hb_046610_010--Hb_001002_020 Hb_007546_010 Hb_007546_010 Hb_046610_010--Hb_007546_010 Hb_021142_030 Hb_021142_030 Hb_046610_010--Hb_021142_030 Hb_054165_010--Hb_001002_020 Hb_005928_010 Hb_005928_010 Hb_054165_010--Hb_005928_010 Hb_000277_030 Hb_000277_030 Hb_054165_010--Hb_000277_030 Hb_006083_010 Hb_006083_010 Hb_054165_010--Hb_006083_010 Hb_136973_020 Hb_136973_020 Hb_054165_010--Hb_136973_020 Hb_164577_010--Hb_000997_130 Hb_164577_010--Hb_007546_010 Hb_008637_020 Hb_008637_020 Hb_164577_010--Hb_008637_020 Hb_002289_180 Hb_002289_180 Hb_164577_010--Hb_002289_180 Hb_000819_020 Hb_000819_020 Hb_164577_010--Hb_000819_020 Hb_000997_130--Hb_002289_180 Hb_000997_130--Hb_007546_010 Hb_000164_160 Hb_000164_160 Hb_000997_130--Hb_000164_160 Hb_010223_010 Hb_010223_010 Hb_000997_130--Hb_010223_010 Hb_001002_020--Hb_005928_010 Hb_001002_020--Hb_000277_030 Hb_001002_020--Hb_136973_020 Hb_003847_090 Hb_003847_090 Hb_001002_020--Hb_003847_090 Hb_001002_020--Hb_006083_010 Hb_002066_050 Hb_002066_050 Hb_007546_010--Hb_002066_050 Hb_001511_200 Hb_001511_200 Hb_007546_010--Hb_001511_200 Hb_007546_010--Hb_008637_020 Hb_009385_010 Hb_009385_010 Hb_021142_030--Hb_009385_010 Hb_007747_070 Hb_007747_070 Hb_021142_030--Hb_007747_070 Hb_001410_040 Hb_001410_040 Hb_021142_030--Hb_001410_040 Hb_007894_040 Hb_007894_040 Hb_021142_030--Hb_007894_040 Hb_004788_030 Hb_004788_030 Hb_021142_030--Hb_004788_030 Hb_008821_030 Hb_008821_030 Hb_021142_030--Hb_008821_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.103985 0.135434 0.0668611 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis