Hb_046739_010

Information

Type -
Description -
Location Contig46739: 153-1688
Sequence    

Annotation

kegg
ID rcu:RCOM_1310660
description wall-associated kinase, putative (EC:2.7.10.2)
nr
ID XP_012075734.1
description PREDICTED: probable serine/threonine-protein kinase At1g18390 isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KT69
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09327 PE=3 SV=1
Gene Ontology
ID GO:0000166
description probable serine threonine-protein kinase at1g18390 isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_046739_010 0.0 - - PREDICTED: probable serine/threonine-protein kinase At1g18390 isoform X1 [Jatropha curcas]
2 Hb_000031_320 0.0543125516 - - unnamed protein product [Vitis vinifera]
3 Hb_002407_090 0.0620704054 - - hypothetical protein JCGZ_00747 [Jatropha curcas]
4 Hb_011028_030 0.0666879403 - - conserved hypothetical protein [Ricinus communis]
5 Hb_033363_030 0.0865589571 - - PREDICTED: serine/threonine-protein kinase STN7, chloroplastic [Jatropha curcas]
6 Hb_002010_030 0.090111459 - - Phytosulfokine receptor precursor, putative [Ricinus communis]
7 Hb_096224_050 0.0970137477 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g31250 [Jatropha curcas]
8 Hb_004017_030 0.0998063296 - - PREDICTED: 2-hydroxyisoflavanone dehydratase-like [Jatropha curcas]
9 Hb_186844_010 0.0999967738 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
10 Hb_003767_060 0.1019679951 - - PREDICTED: serine/threonine-protein kinase CDL1 [Jatropha curcas]
11 Hb_002155_020 0.1047166677 - - PREDICTED: probable WRKY transcription factor 65 [Jatropha curcas]
12 Hb_002818_160 0.105836517 - - PREDICTED: uncharacterized protein LOC105642722 [Jatropha curcas]
13 Hb_000373_010 0.1058851365 - - ATP binding protein, putative [Ricinus communis]
14 Hb_000270_090 0.1060836404 - - nitrate transporter, putative [Ricinus communis]
15 Hb_000705_010 0.1061166251 - - hypothetical protein CICLE_v10027296mg [Citrus clementina]
16 Hb_003209_150 0.1064242096 - - CLE9, putative [Ricinus communis]
17 Hb_003970_010 0.1092193333 - - PREDICTED: sigma factor binding protein 1, chloroplastic-like [Populus euphratica]
18 Hb_001321_010 0.1098169379 - - HIGH-CHLOROPHYLL-FLUORESCENCE 101 family protein [Populus trichocarpa]
19 Hb_019863_050 0.1107089518 - - PREDICTED: uncharacterized protein LOC103343426 [Prunus mume]
20 Hb_000027_110 0.1117002094 - - wall-associated kinase, putative [Ricinus communis]

Gene co-expression network

sample Hb_046739_010 Hb_046739_010 Hb_000031_320 Hb_000031_320 Hb_046739_010--Hb_000031_320 Hb_002407_090 Hb_002407_090 Hb_046739_010--Hb_002407_090 Hb_011028_030 Hb_011028_030 Hb_046739_010--Hb_011028_030 Hb_033363_030 Hb_033363_030 Hb_046739_010--Hb_033363_030 Hb_002010_030 Hb_002010_030 Hb_046739_010--Hb_002010_030 Hb_096224_050 Hb_096224_050 Hb_046739_010--Hb_096224_050 Hb_001677_170 Hb_001677_170 Hb_000031_320--Hb_001677_170 Hb_000031_320--Hb_011028_030 Hb_000031_320--Hb_002407_090 Hb_002818_160 Hb_002818_160 Hb_000031_320--Hb_002818_160 Hb_003970_010 Hb_003970_010 Hb_000031_320--Hb_003970_010 Hb_000608_290 Hb_000608_290 Hb_002407_090--Hb_000608_290 Hb_002407_090--Hb_011028_030 Hb_011104_020 Hb_011104_020 Hb_002407_090--Hb_011104_020 Hb_000270_090 Hb_000270_090 Hb_002407_090--Hb_000270_090 Hb_000373_010 Hb_000373_010 Hb_002407_090--Hb_000373_010 Hb_002155_020 Hb_002155_020 Hb_011028_030--Hb_002155_020 Hb_011028_030--Hb_000373_010 Hb_000644_010 Hb_000644_010 Hb_011028_030--Hb_000644_010 Hb_033363_030--Hb_096224_050 Hb_004979_080 Hb_004979_080 Hb_033363_030--Hb_004979_080 Hb_000027_110 Hb_000027_110 Hb_033363_030--Hb_000027_110 Hb_000668_180 Hb_000668_180 Hb_033363_030--Hb_000668_180 Hb_033363_030--Hb_011028_030 Hb_003767_060 Hb_003767_060 Hb_002010_030--Hb_003767_060 Hb_004017_030 Hb_004017_030 Hb_002010_030--Hb_004017_030 Hb_001369_340 Hb_001369_340 Hb_002010_030--Hb_001369_340 Hb_004109_140 Hb_004109_140 Hb_002010_030--Hb_004109_140 Hb_005433_020 Hb_005433_020 Hb_002010_030--Hb_005433_020 Hb_007904_110 Hb_007904_110 Hb_096224_050--Hb_007904_110 Hb_004979_070 Hb_004979_070 Hb_096224_050--Hb_004979_070 Hb_096224_050--Hb_000644_010 Hb_096224_050--Hb_004979_080 Hb_096224_050--Hb_000027_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.81336 3.51131 1.32387 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.240093 5.06109

CAGE analysis