Hb_046994_010

Information

Type -
Description -
Location Contig46994: 94-685
Sequence    

Annotation

kegg
ID rcu:RCOM_0304060
description hypothetical protein
nr
ID XP_012086191.1
description PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JQ32
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21104 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_046994_010 0.0 - - PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
2 Hb_004800_170 0.2272686823 - - PREDICTED: cytochrome P450 90B1 [Jatropha curcas]
3 Hb_002301_390 0.2294255377 - - -
4 Hb_002233_040 0.2383623192 - - PREDICTED: uncharacterized protein LOC105629659 [Jatropha curcas]
5 Hb_004143_120 0.2535007811 - - PREDICTED: serine/threonine-protein kinase CTR1 [Jatropha curcas]
6 Hb_005389_190 0.2577432719 - - glutamate receptor 2 plant, putative [Ricinus communis]
7 Hb_144004_010 0.2581022671 - - hypothetical protein JCGZ_01009 [Jatropha curcas]
8 Hb_003428_100 0.2582982622 - - Polygalacturonase precursor, putative [Ricinus communis]
9 Hb_024621_030 0.2641304624 - - tetraketide alpha-pyrone reductase 2 [Jatropha curcas]
10 Hb_000120_390 0.2740374894 - - PREDICTED: uncharacterized transporter YBR287W-like [Jatropha curcas]
11 Hb_000699_170 0.2774858844 - - myosin XI, putative [Ricinus communis]
12 Hb_002006_140 0.2823611619 transcription factor TF Family: ERF hypothetical protein POPTR_0012s11030g [Populus trichocarpa]
13 Hb_000010_120 0.29075902 - - PREDICTED: cytochrome P450 71A26-like [Jatropha curcas]
14 Hb_000165_210 0.2944404424 - - PREDICTED: trihelix transcription factor ASIL2 isoform X2 [Jatropha curcas]
15 Hb_000390_260 0.2954056572 transcription factor TF Family: MYB Myb domain protein 107 [Theobroma cacao]
16 Hb_000384_050 0.295785178 - - hypothetical protein POPTR_0077s002402g, partial [Populus trichocarpa]
17 Hb_000975_150 0.2971449074 - - PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH8 isoform X1 [Jatropha curcas]
18 Hb_002325_020 0.3005316414 - - zinc finger protein, putative [Ricinus communis]
19 Hb_005144_020 0.3019440995 transcription factor TF Family: MYB hypothetical protein POPTR_0009s01270g [Populus trichocarpa]
20 Hb_182680_010 0.3034225743 - - hypothetical protein JCGZ_07831 [Jatropha curcas]

Gene co-expression network

sample Hb_046994_010 Hb_046994_010 Hb_004800_170 Hb_004800_170 Hb_046994_010--Hb_004800_170 Hb_002301_390 Hb_002301_390 Hb_046994_010--Hb_002301_390 Hb_002233_040 Hb_002233_040 Hb_046994_010--Hb_002233_040 Hb_004143_120 Hb_004143_120 Hb_046994_010--Hb_004143_120 Hb_005389_190 Hb_005389_190 Hb_046994_010--Hb_005389_190 Hb_144004_010 Hb_144004_010 Hb_046994_010--Hb_144004_010 Hb_002918_230 Hb_002918_230 Hb_004800_170--Hb_002918_230 Hb_000975_150 Hb_000975_150 Hb_004800_170--Hb_000975_150 Hb_000879_190 Hb_000879_190 Hb_004800_170--Hb_000879_190 Hb_024621_030 Hb_024621_030 Hb_004800_170--Hb_024621_030 Hb_002006_140 Hb_002006_140 Hb_004800_170--Hb_002006_140 Hb_000056_330 Hb_000056_330 Hb_004800_170--Hb_000056_330 Hb_000025_430 Hb_000025_430 Hb_002301_390--Hb_000025_430 Hb_000120_390 Hb_000120_390 Hb_002301_390--Hb_000120_390 Hb_000417_320 Hb_000417_320 Hb_002301_390--Hb_000417_320 Hb_094437_060 Hb_094437_060 Hb_002301_390--Hb_094437_060 Hb_000805_320 Hb_000805_320 Hb_002301_390--Hb_000805_320 Hb_002233_040--Hb_004143_120 Hb_002233_040--Hb_000975_150 Hb_000061_090 Hb_000061_090 Hb_002233_040--Hb_000061_090 Hb_002233_040--Hb_005389_190 Hb_107201_010 Hb_107201_010 Hb_002233_040--Hb_107201_010 Hb_000343_100 Hb_000343_100 Hb_004143_120--Hb_000343_100 Hb_182680_010 Hb_182680_010 Hb_004143_120--Hb_182680_010 Hb_003428_100 Hb_003428_100 Hb_004143_120--Hb_003428_100 Hb_004143_120--Hb_005389_190 Hb_000181_020 Hb_000181_020 Hb_004143_120--Hb_000181_020 Hb_112203_010 Hb_112203_010 Hb_005389_190--Hb_112203_010 Hb_003517_010 Hb_003517_010 Hb_005389_190--Hb_003517_010 Hb_005389_190--Hb_000343_100 Hb_005389_190--Hb_144004_010 Hb_005389_190--Hb_002006_140 Hb_000363_470 Hb_000363_470 Hb_144004_010--Hb_000363_470 Hb_144004_010--Hb_003517_010 Hb_144004_010--Hb_112203_010 Hb_001675_230 Hb_001675_230 Hb_144004_010--Hb_001675_230 Hb_000666_020 Hb_000666_020 Hb_144004_010--Hb_000666_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.285965 0.0879366 0 0.215018 0.106037
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.535095 0.105095 0.178115 2.88296 0.196558

CAGE analysis