Hb_047661_010

Information

Type -
Description -
Location Contig47661: 3695-4614
Sequence    

Annotation

kegg
ID pda:103696607
description uncharacterized LOC103696607
nr
ID XP_008776509.1
description PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103696607 [Phoenix dactylifera]
swissprot
ID -
description -
trembl
ID E2DN01
description Putative uncharacterized protein OS=Beta vulgaris PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_047661_010 0.0 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103696607 [Phoenix dactylifera]
2 Hb_005989_010 0.148803739 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103696607 [Phoenix dactylifera]
3 Hb_001159_210 0.1670257416 - - PREDICTED: MATE efflux family protein DTX1 [Jatropha curcas]
4 Hb_009973_020 0.1827087929 - - PREDICTED: uncharacterized protein LOC104889111 [Beta vulgaris subsp. vulgaris]
5 Hb_023323_010 0.1956007428 - - PREDICTED: uncharacterized protein LOC104901296 [Beta vulgaris subsp. vulgaris]
6 Hb_004460_020 0.218796841 - - chaperone protein DNAj, putative [Ricinus communis]
7 Hb_002374_560 0.2207648883 - - PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH11-like [Populus euphratica]
8 Hb_002326_060 0.2232042489 - - PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 3 [Populus euphratica]
9 Hb_003529_220 0.2295691013 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_00222 [Jatropha curcas]
10 Hb_000038_150 0.2370924649 - - PREDICTED: E3 ubiquitin-protein ligase RNF181 homolog [Jatropha curcas]
11 Hb_001678_020 0.239832135 - - PREDICTED: uncharacterized protein LOC105160092 [Sesamum indicum]
12 Hb_134732_010 0.2406045102 - - -
13 Hb_001135_270 0.2426052368 - - -
14 Hb_005799_030 0.2431246865 - - PREDICTED: uncharacterized protein LOC103926623 [Pyrus x bretschneideri]
15 Hb_002518_300 0.2455339297 - - PREDICTED: UPF0503 protein At3g09070, chloroplastic [Jatropha curcas]
16 Hb_001899_010 0.2480224705 - - PREDICTED: probable ubiquitin conjugation factor E4 isoform X2 [Jatropha curcas]
17 Hb_000001_160 0.2499508488 - - PREDICTED: probable glutamate carboxypeptidase 2 isoform X2 [Jatropha curcas]
18 Hb_081636_010 0.2499771189 - - -
19 Hb_003243_020 0.256016409 - - PREDICTED: uncharacterized protein LOC105629849 [Jatropha curcas]
20 Hb_001584_230 0.2565070862 - - invertase/pectin methylesterase inhibitor family protein [Populus trichocarpa]

Gene co-expression network

sample Hb_047661_010 Hb_047661_010 Hb_005989_010 Hb_005989_010 Hb_047661_010--Hb_005989_010 Hb_001159_210 Hb_001159_210 Hb_047661_010--Hb_001159_210 Hb_009973_020 Hb_009973_020 Hb_047661_010--Hb_009973_020 Hb_023323_010 Hb_023323_010 Hb_047661_010--Hb_023323_010 Hb_004460_020 Hb_004460_020 Hb_047661_010--Hb_004460_020 Hb_002374_560 Hb_002374_560 Hb_047661_010--Hb_002374_560 Hb_005989_010--Hb_023323_010 Hb_005989_010--Hb_009973_020 Hb_003529_220 Hb_003529_220 Hb_005989_010--Hb_003529_220 Hb_001899_010 Hb_001899_010 Hb_005989_010--Hb_001899_010 Hb_005989_010--Hb_001159_210 Hb_000038_150 Hb_000038_150 Hb_001159_210--Hb_000038_150 Hb_002326_060 Hb_002326_060 Hb_001159_210--Hb_002326_060 Hb_134732_010 Hb_134732_010 Hb_001159_210--Hb_134732_010 Hb_001159_210--Hb_004460_020 Hb_003320_030 Hb_003320_030 Hb_001159_210--Hb_003320_030 Hb_009973_020--Hb_023323_010 Hb_021068_010 Hb_021068_010 Hb_009973_020--Hb_021068_010 Hb_159555_010 Hb_159555_010 Hb_009973_020--Hb_159555_010 Hb_001678_020 Hb_001678_020 Hb_009973_020--Hb_001678_020 Hb_023323_010--Hb_001678_020 Hb_000322_110 Hb_000322_110 Hb_023323_010--Hb_000322_110 Hb_005656_060 Hb_005656_060 Hb_023323_010--Hb_005656_060 Hb_001767_020 Hb_001767_020 Hb_004460_020--Hb_001767_020 Hb_004102_130 Hb_004102_130 Hb_004460_020--Hb_004102_130 Hb_004460_020--Hb_000038_150 Hb_008147_030 Hb_008147_030 Hb_004460_020--Hb_008147_030 Hb_001268_230 Hb_001268_230 Hb_004460_020--Hb_001268_230 Hb_000001_160 Hb_000001_160 Hb_002374_560--Hb_000001_160 Hb_002374_560--Hb_002326_060 Hb_002374_560--Hb_001159_210 Hb_001621_160 Hb_001621_160 Hb_002374_560--Hb_001621_160 Hb_002518_300 Hb_002518_300 Hb_002374_560--Hb_002518_300
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.655227 0.075371 0.029802 0.0374552 2.69754 2.11341
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.119595 0.164717 0.265008

CAGE analysis