Hb_048207_010

Information

Type -
Description -
Location Contig48207: 401-985
Sequence    

Annotation

kegg
ID rcu:RCOM_0731960
description heat-shock protein, putative
nr
ID XP_002520481.1
description heat-shock protein, putative [Ricinus communis]
swissprot
ID P02519
description 17.3 kDa class I heat shock protein OS=Glycine max GN=HSP17.3-B PE=3 SV=1
trembl
ID B9S3B2
description Heat-shock protein, putative OS=Ricinus communis GN=RCOM_0731960 PE=3 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_048207_010 0.0 - - heat-shock protein, putative [Ricinus communis]
2 Hb_000796_060 0.1255162918 - - Glycogenin-2 [Aegilops tauschii]
3 Hb_001104_040 0.1960428142 - - PREDICTED: uncharacterized protein LOC105629509 [Jatropha curcas]
4 Hb_001279_230 0.2290695037 - - PREDICTED: class I heat shock protein-like [Jatropha curcas]
5 Hb_006634_010 0.2313552052 - - -
6 Hb_009189_060 0.2323705475 - - PREDICTED: pentatricopeptide repeat-containing protein At3g49170, chloroplastic [Jatropha curcas]
7 Hb_005730_100 0.2446346136 - - PREDICTED: 18.2 kDa class I heat shock protein-like [Gossypium raimondii]
8 Hb_003647_120 0.2480882387 - - 18.2 kDa class I heat shock family protein [Populus trichocarpa]
9 Hb_000398_130 0.2575728184 - - PREDICTED: 22.0 kDa class IV heat shock protein-like [Jatropha curcas]
10 Hb_168893_010 0.2634883474 - - PREDICTED: 17.3 kDa class I heat shock protein-like [Nelumbo nucifera]
11 Hb_116436_010 0.2646972185 - - PREDICTED: uncharacterized protein LOC105766967 [Gossypium raimondii]
12 Hb_010555_020 0.2696189122 - - hypothetical protein JCGZ_06771 [Jatropha curcas]
13 Hb_002890_190 0.2815686191 - - PREDICTED: 22.0 kDa class IV heat shock protein-like [Jatropha curcas]
14 Hb_000891_080 0.2822897658 - - PREDICTED: TMV resistance protein N-like, partial [Populus euphratica]
15 Hb_004529_020 0.2840517302 - - PREDICTED: uncharacterized protein LOC105629509 [Jatropha curcas]
16 Hb_000488_030 0.2862048149 - - PREDICTED: 17.3 kDa class I heat shock protein-like [Jatropha curcas]
17 Hb_029980_010 0.2888870896 - - PREDICTED: 17.3 kDa class I heat shock protein-like [Jatropha curcas]
18 Hb_184326_010 0.2910623743 - - RecName: Full=Anthocyanidin 3-O-glucosyltransferase 1; AltName: Full=Flavonol 3-O-glucosyltransferase 1; AltName: Full=UDP-glucose flavonoid 3-O-glucosyltransferase 1 [Manihot esculenta]
19 Hb_004970_040 0.2955535174 - - PREDICTED: subtilisin-like protease SBT1.7 [Jatropha curcas]
20 Hb_001723_110 0.2967192715 - - PREDICTED: solute carrier family 25 member 44-like isoform X2 [Malus domestica]

Gene co-expression network

sample Hb_048207_010 Hb_048207_010 Hb_000796_060 Hb_000796_060 Hb_048207_010--Hb_000796_060 Hb_001104_040 Hb_001104_040 Hb_048207_010--Hb_001104_040 Hb_001279_230 Hb_001279_230 Hb_048207_010--Hb_001279_230 Hb_006634_010 Hb_006634_010 Hb_048207_010--Hb_006634_010 Hb_009189_060 Hb_009189_060 Hb_048207_010--Hb_009189_060 Hb_005730_100 Hb_005730_100 Hb_048207_010--Hb_005730_100 Hb_168893_010 Hb_168893_010 Hb_000796_060--Hb_168893_010 Hb_000796_060--Hb_005730_100 Hb_000796_060--Hb_001104_040 Hb_000796_060--Hb_001279_230 Hb_000398_130 Hb_000398_130 Hb_000796_060--Hb_000398_130 Hb_001104_040--Hb_001279_230 Hb_004529_020 Hb_004529_020 Hb_001104_040--Hb_004529_020 Hb_116436_010 Hb_116436_010 Hb_001104_040--Hb_116436_010 Hb_003647_120 Hb_003647_120 Hb_001104_040--Hb_003647_120 Hb_092043_020 Hb_092043_020 Hb_001104_040--Hb_092043_020 Hb_001279_230--Hb_003647_120 Hb_003337_070 Hb_003337_070 Hb_001279_230--Hb_003337_070 Hb_184326_010 Hb_184326_010 Hb_001279_230--Hb_184326_010 Hb_001723_110 Hb_001723_110 Hb_001279_230--Hb_001723_110 Hb_006745_020 Hb_006745_020 Hb_001279_230--Hb_006745_020 Hb_006634_010--Hb_009189_060 Hb_171273_010 Hb_171273_010 Hb_006634_010--Hb_171273_010 Hb_002426_010 Hb_002426_010 Hb_006634_010--Hb_002426_010 Hb_001031_060 Hb_001031_060 Hb_006634_010--Hb_001031_060 Hb_000510_220 Hb_000510_220 Hb_006634_010--Hb_000510_220 Hb_009189_060--Hb_002426_010 Hb_009189_060--Hb_000510_220 Hb_009189_060--Hb_171273_010 Hb_009189_060--Hb_001031_060 Hb_002890_190 Hb_002890_190 Hb_005730_100--Hb_002890_190 Hb_000891_080 Hb_000891_080 Hb_005730_100--Hb_000891_080 Hb_029980_010 Hb_029980_010 Hb_005730_100--Hb_029980_010 Hb_000488_030 Hb_000488_030 Hb_005730_100--Hb_000488_030 Hb_005730_100--Hb_001104_040 Hb_005730_100--Hb_000398_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.237204 0.0628146 0 1.05986 0.203908
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis