Hb_048476_110

Information

Type -
Description -
Location Contig48476: 66055-69974
Sequence    

Annotation

kegg
ID vvi:100255972
description adagio protein 3
nr
ID XP_012072312.1
description PREDICTED: adagio protein 3 [Jatropha curcas]
swissprot
ID Q9C9W9
description Adagio protein 3 OS=Arabidopsis thaliana GN=ADO3 PE=1 SV=1
trembl
ID A0A067KPI3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04764 PE=4 SV=1
Gene Ontology
ID GO:0001047
description adagio protein 3

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_048476_110 0.0 - - PREDICTED: adagio protein 3 [Jatropha curcas]
2 Hb_000059_360 0.069259525 - - PREDICTED: uncharacterized protein LOC105648671 [Jatropha curcas]
3 Hb_003813_030 0.0813327392 - - PREDICTED: mannose-6-phosphate isomerase 1 [Jatropha curcas]
4 Hb_000000_210 0.0867267226 - - PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like isoform X1 [Jatropha curcas]
5 Hb_007044_120 0.0886147435 - - PREDICTED: probable transmembrane ascorbate ferrireductase 2 [Jatropha curcas]
6 Hb_001277_070 0.0921111032 - - PREDICTED: guanine nucleotide-binding protein subunit gamma 2 isoform X1 [Jatropha curcas]
7 Hb_000580_090 0.0951496723 - - PREDICTED: tRNA 2'-phosphotransferase 1 isoform X1 [Jatropha curcas]
8 Hb_000771_120 0.0991669502 - - PREDICTED: uncharacterized protein LOC105648352 isoform X1 [Jatropha curcas]
9 Hb_000155_200 0.1001109034 - - Rab7 [Hevea brasiliensis]
10 Hb_004195_270 0.1008602202 - - Ubiquitin-conjugating enzyme 16 [Theobroma cacao]
11 Hb_003607_150 0.102572805 - - PREDICTED: thioredoxin-like protein 4B [Jatropha curcas]
12 Hb_011224_110 0.1036696575 - - Pre-mRNA-splicing factor cwc15, putative [Ricinus communis]
13 Hb_010560_020 0.1046235378 - - PREDICTED: uncharacterized protein LOC105649267 [Jatropha curcas]
14 Hb_001662_070 0.1059918236 - - PREDICTED: thiol-disulfide oxidoreductase LTO1 [Jatropha curcas]
15 Hb_008686_080 0.1064082093 - - PREDICTED: DNA-directed RNA polymerase V subunit 5A-like [Jatropha curcas]
16 Hb_000205_090 0.1065217957 - - hypothetical protein POPTR_0019s03570g [Populus trichocarpa]
17 Hb_004324_070 0.1069791855 - - protein phosphatase 2C [Hevea brasiliensis]
18 Hb_011519_010 0.108514495 - - PREDICTED: uncharacterized protein LOC105645310 [Jatropha curcas]
19 Hb_004109_170 0.1085424377 - - PREDICTED: probable ribokinase [Jatropha curcas]
20 Hb_000787_050 0.1086722168 - - PREDICTED: electron transfer flavoprotein subunit alpha, mitochondrial-like [Jatropha curcas]

Gene co-expression network

sample Hb_048476_110 Hb_048476_110 Hb_000059_360 Hb_000059_360 Hb_048476_110--Hb_000059_360 Hb_003813_030 Hb_003813_030 Hb_048476_110--Hb_003813_030 Hb_000000_210 Hb_000000_210 Hb_048476_110--Hb_000000_210 Hb_007044_120 Hb_007044_120 Hb_048476_110--Hb_007044_120 Hb_001277_070 Hb_001277_070 Hb_048476_110--Hb_001277_070 Hb_000580_090 Hb_000580_090 Hb_048476_110--Hb_000580_090 Hb_000059_360--Hb_007044_120 Hb_002374_100 Hb_002374_100 Hb_000059_360--Hb_002374_100 Hb_003207_190 Hb_003207_190 Hb_000059_360--Hb_003207_190 Hb_001221_210 Hb_001221_210 Hb_000059_360--Hb_001221_210 Hb_000059_360--Hb_003813_030 Hb_003813_030--Hb_000580_090 Hb_000827_050 Hb_000827_050 Hb_003813_030--Hb_000827_050 Hb_004109_170 Hb_004109_170 Hb_003813_030--Hb_004109_170 Hb_000236_040 Hb_000236_040 Hb_003813_030--Hb_000236_040 Hb_000175_340 Hb_000175_340 Hb_003813_030--Hb_000175_340 Hb_180424_010 Hb_180424_010 Hb_000000_210--Hb_180424_010 Hb_011519_010 Hb_011519_010 Hb_000000_210--Hb_011519_010 Hb_000853_430 Hb_000853_430 Hb_000000_210--Hb_000853_430 Hb_004934_030 Hb_004934_030 Hb_000000_210--Hb_004934_030 Hb_004678_040 Hb_004678_040 Hb_000000_210--Hb_004678_040 Hb_021596_090 Hb_021596_090 Hb_007044_120--Hb_021596_090 Hb_000638_250 Hb_000638_250 Hb_007044_120--Hb_000638_250 Hb_000403_060 Hb_000403_060 Hb_007044_120--Hb_000403_060 Hb_148121_040 Hb_148121_040 Hb_007044_120--Hb_148121_040 Hb_007044_120--Hb_000175_340 Hb_000120_960 Hb_000120_960 Hb_007044_120--Hb_000120_960 Hb_012505_010 Hb_012505_010 Hb_001277_070--Hb_012505_010 Hb_000608_370 Hb_000608_370 Hb_001277_070--Hb_000608_370 Hb_011224_110 Hb_011224_110 Hb_001277_070--Hb_011224_110 Hb_129204_030 Hb_129204_030 Hb_001277_070--Hb_129204_030 Hb_003581_150 Hb_003581_150 Hb_001277_070--Hb_003581_150 Hb_153112_020 Hb_153112_020 Hb_001277_070--Hb_153112_020 Hb_000580_090--Hb_004109_170 Hb_012286_030 Hb_012286_030 Hb_000580_090--Hb_012286_030 Hb_000656_240 Hb_000656_240 Hb_000580_090--Hb_000656_240 Hb_004116_190 Hb_004116_190 Hb_000580_090--Hb_004116_190 Hb_000815_320 Hb_000815_320 Hb_000580_090--Hb_000815_320 Hb_001105_030 Hb_001105_030 Hb_000580_090--Hb_001105_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.4106 2.21188 7.07871 2.41005 4.49754 3.75002
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
7.46358 7.52877 8.30421 2.80952 2.30343

CAGE analysis