Hb_048610_010

Information

Type -
Description -
Location Contig48610: 730-2568
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_048610_010 0.0 - - -
2 Hb_029162_020 0.0194140455 - - -
3 Hb_001230_010 0.2218725507 - - -
4 Hb_144101_010 0.2261202368 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance RPP13-like protein 1 [Vitis vinifera]
5 Hb_002007_290 0.2337981879 - - -
6 Hb_031862_050 0.2403790711 - - Cell division cycle protein, putative [Ricinus communis]
7 Hb_168418_010 0.2842077567 - - PREDICTED: uncharacterized protein LOC104234330 [Nicotiana sylvestris]
8 Hb_002928_100 0.2845538516 - - -
9 Hb_036285_010 0.2923711886 - - -
10 Hb_002205_200 0.3010102638 - - PREDICTED: uncharacterized protein LOC105649174 [Jatropha curcas]
11 Hb_002094_020 0.3017435464 - - PREDICTED: alpha-copaene synthase-like [Jatropha curcas]
12 Hb_010588_010 0.3045300246 - - -
13 Hb_002307_070 0.3103785548 - - hypothetical protein JCGZ_14841 [Jatropha curcas]
14 Hb_174107_010 0.3192552555 - - PREDICTED: uncharacterized protein LOC105775323 [Gossypium raimondii]
15 Hb_027751_030 0.3212439288 - - -
16 Hb_000928_230 0.3273168173 - - conserved hypothetical protein [Ricinus communis]
17 Hb_026766_010 0.3307378514 - - -
18 Hb_166548_010 0.3352698759 - - hypothetical protein JCGZ_09681 [Jatropha curcas]
19 Hb_187661_010 0.3368161997 - - PREDICTED: thylakoidal processing peptidase 1, chloroplastic-like [Jatropha curcas]
20 Hb_021888_110 0.3370278138 - - -

Gene co-expression network

sample Hb_048610_010 Hb_048610_010 Hb_029162_020 Hb_029162_020 Hb_048610_010--Hb_029162_020 Hb_001230_010 Hb_001230_010 Hb_048610_010--Hb_001230_010 Hb_144101_010 Hb_144101_010 Hb_048610_010--Hb_144101_010 Hb_002007_290 Hb_002007_290 Hb_048610_010--Hb_002007_290 Hb_031862_050 Hb_031862_050 Hb_048610_010--Hb_031862_050 Hb_168418_010 Hb_168418_010 Hb_048610_010--Hb_168418_010 Hb_029162_020--Hb_144101_010 Hb_029162_020--Hb_001230_010 Hb_029162_020--Hb_031862_050 Hb_029162_020--Hb_002007_290 Hb_029162_020--Hb_168418_010 Hb_001230_010--Hb_002007_290 Hb_166786_030 Hb_166786_030 Hb_001230_010--Hb_166786_030 Hb_002094_020 Hb_002094_020 Hb_001230_010--Hb_002094_020 Hb_000928_230 Hb_000928_230 Hb_001230_010--Hb_000928_230 Hb_001230_010--Hb_031862_050 Hb_017111_010 Hb_017111_010 Hb_001230_010--Hb_017111_010 Hb_021888_110 Hb_021888_110 Hb_144101_010--Hb_021888_110 Hb_036285_010 Hb_036285_010 Hb_144101_010--Hb_036285_010 Hb_000025_100 Hb_000025_100 Hb_144101_010--Hb_000025_100 Hb_000025_060 Hb_000025_060 Hb_144101_010--Hb_000025_060 Hb_002007_290--Hb_166786_030 Hb_002007_290--Hb_002094_020 Hb_002007_290--Hb_000928_230 Hb_002007_290--Hb_017111_010 Hb_002007_290--Hb_031862_050 Hb_031862_050--Hb_168418_010 Hb_000046_020 Hb_000046_020 Hb_031862_050--Hb_000046_020 Hb_010588_010 Hb_010588_010 Hb_168418_010--Hb_010588_010 Hb_113733_010 Hb_113733_010 Hb_168418_010--Hb_113733_010 Hb_002750_020 Hb_002750_020 Hb_168418_010--Hb_002750_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.33471 0 0 0 0 0.961639
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.339752 0.2674 0 0 0

CAGE analysis