Hb_048937_010

Information

Type -
Description -
Location Contig48937: 6201-8135
Sequence    

Annotation

kegg
ID pop:POPTR_0007s15010g
description POPTRDRAFT_870279; hypothetical protein
nr
ID XP_010254613.1
description PREDICTED: L-type lectin-domain containing receptor kinase IX.1 [Nelumbo nucifera]
swissprot
ID Q9LXA5
description L-type lectin-domain containing receptor kinase IX.1 OS=Arabidopsis thaliana GN=LECRK91 PE=2 SV=1
trembl
ID B9HG10
description Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s15010g PE=3 SV=1
Gene Ontology
ID GO:0004672
description l-type lectin-domain containing receptor kinase -like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_048937_010 0.0 - - PREDICTED: L-type lectin-domain containing receptor kinase IX.1 [Nelumbo nucifera]
2 Hb_145268_010 0.0739369807 - - PREDICTED: proline-rich receptor-like protein kinase PERK15 [Jatropha curcas]
3 Hb_001019_140 0.08447637 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
4 Hb_004096_140 0.09123738 - - Lipase, putative [Ricinus communis]
5 Hb_001213_080 0.0994130606 - - PREDICTED: tubulin beta chain-like [Jatropha curcas]
6 Hb_000128_090 0.1093143325 - - Reticuline oxidase precursor, putative [Ricinus communis]
7 Hb_002035_020 0.1131483847 transcription factor TF Family: TRAF hypothetical protein B456_011G050200 [Gossypium raimondii]
8 Hb_138705_010 0.1142108548 - - PREDICTED: receptor-like protein kinase [Jatropha curcas]
9 Hb_002049_030 0.1153283084 - - PREDICTED: uncharacterized protein LOC105635940 isoform X3 [Jatropha curcas]
10 Hb_158110_010 0.1317157416 - - hypothetical protein CICLE_v10012017mg [Citrus clementina]
11 Hb_148914_020 0.1347118139 - - PREDICTED: uncharacterized protein LOC105637821 [Jatropha curcas]
12 Hb_000925_020 0.1400885001 - - PREDICTED: protein YLS9 [Jatropha curcas]
13 Hb_007313_050 0.1415146413 - - Histidine-containing phosphotransfer protein, putative [Ricinus communis]
14 Hb_005389_090 0.1504232997 transcription factor TF Family: AUX/IAA Auxin-responsive protein IAA27, putative [Ricinus communis]
15 Hb_038718_010 0.1513130651 - - Disease resistance protein RFL1, putative [Ricinus communis]
16 Hb_010642_010 0.1521666746 - - PREDICTED: aquaporin TIP2-1 [Jatropha curcas]
17 Hb_000286_210 0.1532349071 - - hypothetical protein EUGRSUZ_C00018 [Eucalyptus grandis]
18 Hb_001663_090 0.155134494 - - ribonuclease t2, putative [Ricinus communis]
19 Hb_008352_020 0.1554668369 - - hypothetical protein [Cecembia lonarensis]
20 Hb_001059_050 0.1568403108 - - PREDICTED: putative F-box/LRR-repeat protein At3g18150 [Jatropha curcas]

Gene co-expression network

sample Hb_048937_010 Hb_048937_010 Hb_145268_010 Hb_145268_010 Hb_048937_010--Hb_145268_010 Hb_001019_140 Hb_001019_140 Hb_048937_010--Hb_001019_140 Hb_004096_140 Hb_004096_140 Hb_048937_010--Hb_004096_140 Hb_001213_080 Hb_001213_080 Hb_048937_010--Hb_001213_080 Hb_000128_090 Hb_000128_090 Hb_048937_010--Hb_000128_090 Hb_002035_020 Hb_002035_020 Hb_048937_010--Hb_002035_020 Hb_145268_010--Hb_000128_090 Hb_008352_020 Hb_008352_020 Hb_145268_010--Hb_008352_020 Hb_010642_010 Hb_010642_010 Hb_145268_010--Hb_010642_010 Hb_145268_010--Hb_001019_140 Hb_001663_090 Hb_001663_090 Hb_145268_010--Hb_001663_090 Hb_138705_010 Hb_138705_010 Hb_001019_140--Hb_138705_010 Hb_002049_030 Hb_002049_030 Hb_001019_140--Hb_002049_030 Hb_001019_140--Hb_004096_140 Hb_003968_010 Hb_003968_010 Hb_001019_140--Hb_003968_010 Hb_006721_060 Hb_006721_060 Hb_004096_140--Hb_006721_060 Hb_004096_140--Hb_003968_010 Hb_004096_140--Hb_138705_010 Hb_000060_080 Hb_000060_080 Hb_004096_140--Hb_000060_080 Hb_007313_050 Hb_007313_050 Hb_001213_080--Hb_007313_050 Hb_148914_020 Hb_148914_020 Hb_001213_080--Hb_148914_020 Hb_001059_050 Hb_001059_050 Hb_001213_080--Hb_001059_050 Hb_000286_210 Hb_000286_210 Hb_001213_080--Hb_000286_210 Hb_001213_080--Hb_000128_090 Hb_038718_010 Hb_038718_010 Hb_000128_090--Hb_038718_010 Hb_000128_090--Hb_148914_020 Hb_000128_090--Hb_010642_010 Hb_002035_020--Hb_038718_010 Hb_002035_020--Hb_000128_090 Hb_002035_020--Hb_004096_140 Hb_002035_020--Hb_001019_140 Hb_002035_020--Hb_001213_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0476655 0.0229346 0.0623812 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.00733118 0

CAGE analysis