Hb_048937_030

Information

Type -
Description -
Location Contig48937: 16668-16970
Sequence    

Annotation

kegg
ID rcu:RCOM_0231790
description hypothetical protein
nr
ID XP_002527240.1
description hypothetical protein RCOM_0231790 [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9SMM1
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0231790 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_048937_030 0.0 - - hypothetical protein RCOM_0231790 [Ricinus communis]
2 Hb_006018_030 0.136694683 - - PREDICTED: uncharacterized protein LOC105108875 isoform X1 [Populus euphratica]
3 Hb_000742_270 0.1402811297 - - PREDICTED: fatty acid 2-hydroxylase 1-like [Jatropha curcas]
4 Hb_011671_400 0.1546689208 - - PREDICTED: cyclin-U4-1 [Jatropha curcas]
5 Hb_000107_070 0.160371921 - - PREDICTED: uncharacterized protein LOC105641007 [Jatropha curcas]
6 Hb_003020_310 0.1689642389 - - glycosyltransferase, putative [Ricinus communis]
7 Hb_000175_610 0.1702933495 transcription factor TF Family: Tify PREDICTED: protein TIFY 8 isoform X3 [Jatropha curcas]
8 Hb_001671_060 0.1721153624 - - fad NAD binding oxidoreductases, putative [Ricinus communis]
9 Hb_078633_010 0.1739188372 - - PREDICTED: RNA-binding protein 24-B isoform X1 [Jatropha curcas]
10 Hb_148121_010 0.1740868835 - - conserved hypothetical protein [Ricinus communis]
11 Hb_011004_010 0.1756111574 - - Mitochondrial carnitine/acylcarnitine carrier protein, putative [Ricinus communis]
12 Hb_075449_050 0.1782090726 - - PREDICTED: premnaspirodiene oxygenase-like [Jatropha curcas]
13 Hb_001507_070 0.1782610764 - - conserved hypothetical protein [Ricinus communis]
14 Hb_003052_040 0.1796474583 - - conserved hypothetical protein [Ricinus communis]
15 Hb_004048_050 0.1832045224 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like [Citrus sinensis]
16 Hb_000250_010 0.1847357783 - - PREDICTED: putative disease resistance protein RGA1 [Jatropha curcas]
17 Hb_054865_130 0.1869875677 - - acyltransferase, putative [Ricinus communis]
18 Hb_008864_060 0.1869922317 - - PREDICTED: uncharacterized protein LOC105634361 [Jatropha curcas]
19 Hb_005000_160 0.1870787573 - - PREDICTED: uncharacterized protein LOC105637882 [Jatropha curcas]
20 Hb_001268_080 0.1873905506 - - catalytic, putative [Ricinus communis]

Gene co-expression network

sample Hb_048937_030 Hb_048937_030 Hb_006018_030 Hb_006018_030 Hb_048937_030--Hb_006018_030 Hb_000742_270 Hb_000742_270 Hb_048937_030--Hb_000742_270 Hb_011671_400 Hb_011671_400 Hb_048937_030--Hb_011671_400 Hb_000107_070 Hb_000107_070 Hb_048937_030--Hb_000107_070 Hb_003020_310 Hb_003020_310 Hb_048937_030--Hb_003020_310 Hb_000175_610 Hb_000175_610 Hb_048937_030--Hb_000175_610 Hb_075449_050 Hb_075449_050 Hb_006018_030--Hb_075449_050 Hb_006018_030--Hb_000107_070 Hb_001391_020 Hb_001391_020 Hb_006018_030--Hb_001391_020 Hb_001638_210 Hb_001638_210 Hb_006018_030--Hb_001638_210 Hb_001671_060 Hb_001671_060 Hb_006018_030--Hb_001671_060 Hb_001507_070 Hb_001507_070 Hb_000742_270--Hb_001507_070 Hb_148121_010 Hb_148121_010 Hb_000742_270--Hb_148121_010 Hb_000032_040 Hb_000032_040 Hb_000742_270--Hb_000032_040 Hb_011004_010 Hb_011004_010 Hb_000742_270--Hb_011004_010 Hb_001268_080 Hb_001268_080 Hb_000742_270--Hb_001268_080 Hb_024714_060 Hb_024714_060 Hb_000742_270--Hb_024714_060 Hb_001276_060 Hb_001276_060 Hb_011671_400--Hb_001276_060 Hb_078633_010 Hb_078633_010 Hb_011671_400--Hb_078633_010 Hb_002260_090 Hb_002260_090 Hb_011671_400--Hb_002260_090 Hb_003095_070 Hb_003095_070 Hb_011671_400--Hb_003095_070 Hb_003052_040 Hb_003052_040 Hb_011671_400--Hb_003052_040 Hb_005000_160 Hb_005000_160 Hb_011671_400--Hb_005000_160 Hb_000107_070--Hb_075449_050 Hb_023214_010 Hb_023214_010 Hb_000107_070--Hb_023214_010 Hb_001035_040 Hb_001035_040 Hb_000107_070--Hb_001035_040 Hb_002000_110 Hb_002000_110 Hb_000107_070--Hb_002000_110 Hb_001741_090 Hb_001741_090 Hb_000107_070--Hb_001741_090 Hb_000107_070--Hb_003020_310 Hb_007120_070 Hb_007120_070 Hb_003020_310--Hb_007120_070 Hb_003020_310--Hb_078633_010 Hb_000077_410 Hb_000077_410 Hb_003020_310--Hb_000077_410 Hb_003020_310--Hb_023214_010 Hb_003020_310--Hb_148121_010 Hb_003020_310--Hb_001035_040 Hb_000175_610--Hb_011004_010 Hb_000260_580 Hb_000260_580 Hb_000175_610--Hb_000260_580 Hb_003371_100 Hb_003371_100 Hb_000175_610--Hb_003371_100 Hb_000175_610--Hb_000742_270 Hb_000175_610--Hb_001507_070 Hb_000175_610--Hb_148121_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
19.3559 0 0.549821 4.47037 1.36851 2.47254
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
44.5381 27.3121 42.7391 1.46574 0.446463

CAGE analysis