Hb_048985_010

Information

Type -
Description -
Location Contig48985: 161-1627
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_048985_010 0.0 - - -
2 Hb_000155_190 0.1018908637 - - conserved hypothetical protein [Ricinus communis]
3 Hb_000977_080 0.1142806723 - - type II inositol 5-phosphatase, putative [Ricinus communis]
4 Hb_000622_310 0.1185009178 - - PREDICTED: BON1-associated protein 2 [Jatropha curcas]
5 Hb_000189_270 0.1189181748 - - PREDICTED: mitochondrial import inner membrane translocase subunit TIM23-1 [Jatropha curcas]
6 Hb_004884_220 0.1220091431 - - hypothetical protein 29 [Hevea brasiliensis]
7 Hb_021068_050 0.1252810237 - - PREDICTED: probable rhamnogalacturonate lyase B [Jatropha curcas]
8 Hb_000417_180 0.125686165 - - 60S ribosomal protein L11, putative [Ricinus communis]
9 Hb_000045_130 0.1257239179 - - 60S acidic ribosomal protein P0A [Hevea brasiliensis]
10 Hb_002553_020 0.125881011 - - conserved hypothetical protein [Ricinus communis]
11 Hb_005237_010 0.131538796 - - PREDICTED: uncharacterized protein LOC105630921 [Jatropha curcas]
12 Hb_003097_150 0.1323902501 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 24 [Jatropha curcas]
13 Hb_003551_020 0.1324715437 - - PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like isoform X1 [Jatropha curcas]
14 Hb_000189_620 0.132597359 - - hypothetical protein JCGZ_23450 [Jatropha curcas]
15 Hb_000019_230 0.1326268307 - - PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Jatropha curcas]
16 Hb_010863_080 0.1359464211 - - PREDICTED: membrane-anchored ubiquitin-fold protein 3-like [Jatropha curcas]
17 Hb_004645_050 0.1359485571 - - PREDICTED: E3 ubiquitin-protein ligase RNF181 [Jatropha curcas]
18 Hb_000576_030 0.1374370099 - - PREDICTED: pentatricopeptide repeat-containing protein At2g20540 [Jatropha curcas]
19 Hb_004195_160 0.1375525269 - - PREDICTED: uncharacterized protein LOC105634617 [Jatropha curcas]
20 Hb_007426_230 0.1384605319 - - hypothetical protein CICLE_v10017932mg [Citrus clementina]

Gene co-expression network

sample Hb_048985_010 Hb_048985_010 Hb_000155_190 Hb_000155_190 Hb_048985_010--Hb_000155_190 Hb_000977_080 Hb_000977_080 Hb_048985_010--Hb_000977_080 Hb_000622_310 Hb_000622_310 Hb_048985_010--Hb_000622_310 Hb_000189_270 Hb_000189_270 Hb_048985_010--Hb_000189_270 Hb_004884_220 Hb_004884_220 Hb_048985_010--Hb_004884_220 Hb_021068_050 Hb_021068_050 Hb_048985_010--Hb_021068_050 Hb_004195_160 Hb_004195_160 Hb_000155_190--Hb_004195_160 Hb_002375_020 Hb_002375_020 Hb_000155_190--Hb_002375_020 Hb_010863_080 Hb_010863_080 Hb_000155_190--Hb_010863_080 Hb_000224_170 Hb_000224_170 Hb_000155_190--Hb_000224_170 Hb_002553_020 Hb_002553_020 Hb_000155_190--Hb_002553_020 Hb_002027_260 Hb_002027_260 Hb_000155_190--Hb_002027_260 Hb_000392_270 Hb_000392_270 Hb_000977_080--Hb_000392_270 Hb_003551_020 Hb_003551_020 Hb_000977_080--Hb_003551_020 Hb_000045_130 Hb_000045_130 Hb_000977_080--Hb_000045_130 Hb_004645_050 Hb_004645_050 Hb_000977_080--Hb_004645_050 Hb_001369_650 Hb_001369_650 Hb_000977_080--Hb_001369_650 Hb_000019_230 Hb_000019_230 Hb_000977_080--Hb_000019_230 Hb_000124_020 Hb_000124_020 Hb_000622_310--Hb_000124_020 Hb_000622_310--Hb_010863_080 Hb_000186_240 Hb_000186_240 Hb_000622_310--Hb_000186_240 Hb_000592_050 Hb_000592_050 Hb_000622_310--Hb_000592_050 Hb_000172_400 Hb_000172_400 Hb_000622_310--Hb_000172_400 Hb_000179_210 Hb_000179_210 Hb_000622_310--Hb_000179_210 Hb_000189_270--Hb_004645_050 Hb_002311_350 Hb_002311_350 Hb_000189_270--Hb_002311_350 Hb_000380_190 Hb_000380_190 Hb_000189_270--Hb_000380_190 Hb_001512_070 Hb_001512_070 Hb_000189_270--Hb_001512_070 Hb_000189_270--Hb_000977_080 Hb_002374_490 Hb_002374_490 Hb_000189_270--Hb_002374_490 Hb_004738_080 Hb_004738_080 Hb_004884_220--Hb_004738_080 Hb_002477_240 Hb_002477_240 Hb_004884_220--Hb_002477_240 Hb_000329_690 Hb_000329_690 Hb_004884_220--Hb_000329_690 Hb_005535_050 Hb_005535_050 Hb_004884_220--Hb_005535_050 Hb_004884_220--Hb_000977_080 Hb_000417_180 Hb_000417_180 Hb_004884_220--Hb_000417_180 Hb_000376_050 Hb_000376_050 Hb_021068_050--Hb_000376_050 Hb_002603_100 Hb_002603_100 Hb_021068_050--Hb_002603_100 Hb_024835_030 Hb_024835_030 Hb_021068_050--Hb_024835_030 Hb_022250_040 Hb_022250_040 Hb_021068_050--Hb_022250_040 Hb_004012_010 Hb_004012_010 Hb_021068_050--Hb_004012_010 Hb_026198_050 Hb_026198_050 Hb_021068_050--Hb_026198_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
20.0358 10.806 1.53272 7.02133 33.8417 18.3996
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
14.1515 32.4088 19.104 6.33707 2.89974

CAGE analysis