Hb_049293_010

Information

Type -
Description -
Location Contig49293: 43-1301
Sequence    

Annotation

kegg
ID rcu:RCOM_0917390
description kinase, putative (EC:2.7.11.25)
nr
ID XP_002530995.1
description kinase, putative [Ricinus communis]
swissprot
ID Q9SCZ4
description Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana GN=FER PE=1 SV=1
trembl
ID B9SYC6
description Kinase, putative OS=Ricinus communis GN=RCOM_0917390 PE=3 SV=1
Gene Ontology
ID GO:0004672
description receptor-like protein kinase feronia

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_049293_010 0.0 - - kinase, putative [Ricinus communis]
2 Hb_000757_020 0.0782835676 - - PREDICTED: multiple C2 and transmembrane domain-containing protein 2 [Jatropha curcas]
3 Hb_003177_090 0.1157479137 - - PREDICTED: filament-like plant protein 4 [Jatropha curcas]
4 Hb_000251_050 0.1237604121 - - hypothetical protein JCGZ_21678 [Jatropha curcas]
5 Hb_001195_370 0.1336890432 - - -
6 Hb_000366_030 0.1349688122 - - PREDICTED: 2-alkenal reductase (NADP(+)-dependent)-like [Jatropha curcas]
7 Hb_000418_150 0.1369838798 - - ABC transporter family protein [Hevea brasiliensis]
8 Hb_002110_090 0.1380804013 - - PREDICTED: transport inhibitor response 1-like protein [Jatropha curcas]
9 Hb_000237_160 0.1475066186 - - BEL1-like homeodomain protein 1 [Morus notabilis]
10 Hb_155150_010 0.1477456217 - - kinase, putative [Ricinus communis]
11 Hb_001496_120 0.1516329751 - - PREDICTED: uncharacterized protein LOC104907627 [Beta vulgaris subsp. vulgaris]
12 Hb_000594_130 0.1558268747 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
13 Hb_000714_120 0.157339442 - - PREDICTED: vacuolar-sorting receptor 6-like [Jatropha curcas]
14 Hb_000438_020 0.1608956654 - - leucine-rich repeat-containing protein 2, lrrc2, putative [Ricinus communis]
15 Hb_001195_250 0.1631664068 - - lrr receptor protein kinase, putative [Ricinus communis]
16 Hb_001080_150 0.1634941729 - - PREDICTED: Niemann-Pick C1 protein-like [Jatropha curcas]
17 Hb_000221_180 0.1636801983 - - VQ motif-containing family protein [Populus trichocarpa]
18 Hb_000731_290 0.1665677576 - - ABC transporter family protein [Hevea brasiliensis]
19 Hb_002099_060 0.1670093769 - - Protein AFR, putative [Ricinus communis]
20 Hb_065525_070 0.1685558739 - - unnamed protein product [Homo sapiens]

Gene co-expression network

sample Hb_049293_010 Hb_049293_010 Hb_000757_020 Hb_000757_020 Hb_049293_010--Hb_000757_020 Hb_003177_090 Hb_003177_090 Hb_049293_010--Hb_003177_090 Hb_000251_050 Hb_000251_050 Hb_049293_010--Hb_000251_050 Hb_001195_370 Hb_001195_370 Hb_049293_010--Hb_001195_370 Hb_000366_030 Hb_000366_030 Hb_049293_010--Hb_000366_030 Hb_000418_150 Hb_000418_150 Hb_049293_010--Hb_000418_150 Hb_000757_020--Hb_003177_090 Hb_000757_020--Hb_000418_150 Hb_155150_010 Hb_155150_010 Hb_000757_020--Hb_155150_010 Hb_000714_120 Hb_000714_120 Hb_000757_020--Hb_000714_120 Hb_000757_020--Hb_000366_030 Hb_006040_170 Hb_006040_170 Hb_003177_090--Hb_006040_170 Hb_001689_030 Hb_001689_030 Hb_003177_090--Hb_001689_030 Hb_002344_080 Hb_002344_080 Hb_003177_090--Hb_002344_080 Hb_003177_090--Hb_000418_150 Hb_143629_200 Hb_143629_200 Hb_003177_090--Hb_143629_200 Hb_001269_520 Hb_001269_520 Hb_000251_050--Hb_001269_520 Hb_002110_090 Hb_002110_090 Hb_000251_050--Hb_002110_090 Hb_002099_060 Hb_002099_060 Hb_000251_050--Hb_002099_060 Hb_001195_250 Hb_001195_250 Hb_000251_050--Hb_001195_250 Hb_000251_050--Hb_000418_150 Hb_030312_030 Hb_030312_030 Hb_001195_370--Hb_030312_030 Hb_000997_290 Hb_000997_290 Hb_001195_370--Hb_000997_290 Hb_000329_080 Hb_000329_080 Hb_001195_370--Hb_000329_080 Hb_000997_320 Hb_000997_320 Hb_001195_370--Hb_000997_320 Hb_001195_370--Hb_000366_030 Hb_001080_150 Hb_001080_150 Hb_001195_370--Hb_001080_150 Hb_001969_130 Hb_001969_130 Hb_000366_030--Hb_001969_130 Hb_000731_290 Hb_000731_290 Hb_000366_030--Hb_000731_290 Hb_011174_080 Hb_011174_080 Hb_000366_030--Hb_011174_080 Hb_000438_020 Hb_000438_020 Hb_000418_150--Hb_000438_020 Hb_004864_020 Hb_004864_020 Hb_000418_150--Hb_004864_020 Hb_001496_120 Hb_001496_120 Hb_000418_150--Hb_001496_120 Hb_000418_150--Hb_002099_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.666175 4.10915 1.39684 4.2035 0.813409 0.599349
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.18207 0.143208 0.132511 3.70724 9.13566

CAGE analysis