Hb_049438_010

Information

Type -
Description -
Location Contig49438: 3350-10411
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_049438_010 0.0 - - -
2 Hb_095413_040 0.0763021298 - - -
3 Hb_017836_010 0.1454316125 - - PREDICTED: Werner Syndrome-like exonuclease [Jatropha curcas]
4 Hb_002498_200 0.1490487775 transcription factor TF Family: G2-like PREDICTED: putative Myb family transcription factor At1g14600 [Jatropha curcas]
5 Hb_000926_220 0.1564886697 - - -
6 Hb_000011_030 0.2054827013 - - hypothetical protein POPTR_0003s18920g [Populus trichocarpa]
7 Hb_000015_110 0.2054827013 - - hypothetical protein MIMGU_mgv1a020753mg, partial [Erythranthe guttata]
8 Hb_000029_040 0.2054827013 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000030_110 0.2054827013 - - -
10 Hb_000034_130 0.2054827013 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
11 Hb_000046_470 0.2054827013 - - glutaredoxin, grx, putative [Ricinus communis]
12 Hb_000058_010 0.2054827013 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
13 Hb_000060_140 0.2054827013 - - -
14 Hb_000070_020 0.2054827013 - - -
15 Hb_000084_300 0.2054827013 - - PREDICTED: putative pentatricopeptide repeat-containing protein At3g11460 [Jatropha curcas]
16 Hb_000152_720 0.2054827013 - - -
17 Hb_000172_600 0.2054827013 - - -
18 Hb_000189_370 0.2054827013 - - cation-transporting atpase plant, putative [Ricinus communis]
19 Hb_000200_250 0.2054827013 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000204_010 0.2054827013 - - hypothetical protein POPTR_0004s13450g [Populus trichocarpa]

Gene co-expression network

sample Hb_049438_010 Hb_049438_010 Hb_095413_040 Hb_095413_040 Hb_049438_010--Hb_095413_040 Hb_017836_010 Hb_017836_010 Hb_049438_010--Hb_017836_010 Hb_002498_200 Hb_002498_200 Hb_049438_010--Hb_002498_200 Hb_000926_220 Hb_000926_220 Hb_049438_010--Hb_000926_220 Hb_000011_030 Hb_000011_030 Hb_049438_010--Hb_000011_030 Hb_000015_110 Hb_000015_110 Hb_049438_010--Hb_000015_110 Hb_095413_040--Hb_017836_010 Hb_095413_040--Hb_000926_220 Hb_095413_040--Hb_002498_200 Hb_003607_030 Hb_003607_030 Hb_095413_040--Hb_003607_030 Hb_009693_040 Hb_009693_040 Hb_095413_040--Hb_009693_040 Hb_017836_010--Hb_000926_220 Hb_017836_010--Hb_003607_030 Hb_017836_010--Hb_009693_040 Hb_007963_050 Hb_007963_050 Hb_017836_010--Hb_007963_050 Hb_122567_010 Hb_122567_010 Hb_002498_200--Hb_122567_010 Hb_002498_200--Hb_017836_010 Hb_002498_200--Hb_000926_220 Hb_011909_090 Hb_011909_090 Hb_002498_200--Hb_011909_090 Hb_000926_220--Hb_003607_030 Hb_000926_220--Hb_009693_040 Hb_000926_220--Hb_007963_050 Hb_000011_030--Hb_000015_110 Hb_000029_040 Hb_000029_040 Hb_000011_030--Hb_000029_040 Hb_000030_110 Hb_000030_110 Hb_000011_030--Hb_000030_110 Hb_000034_130 Hb_000034_130 Hb_000011_030--Hb_000034_130 Hb_000046_470 Hb_000046_470 Hb_000011_030--Hb_000046_470 Hb_000058_010 Hb_000058_010 Hb_000011_030--Hb_000058_010 Hb_000011_030--Hb_000015_110 Hb_000011_030--Hb_000029_040 Hb_000011_030--Hb_000030_110 Hb_000011_030--Hb_000034_130 Hb_000011_030--Hb_000046_470 Hb_000011_030--Hb_000058_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.357583 0 0 0 0.0319077 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis