Hb_049719_010

Information

Type -
Description -
Location Contig49719: 4962-5264
Sequence    

Annotation

kegg
ID rcu:RCOM_0906040
description ATP binding protein, putative (EC:2.7.11.25)
nr
ID XP_002518553.1
description ATP binding protein, putative [Ricinus communis]
swissprot
ID Q8GYA4
description Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana GN=CRK10 PE=1 SV=3
trembl
ID B9RXT4
description ATP binding protein, putative OS=Ricinus communis GN=RCOM_0906040 PE=3 SV=1
Gene Ontology
ID GO:0005622
description cysteine-rich receptor-like protein kinase 10

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_049719_010 0.0 - - ATP binding protein, putative [Ricinus communis]
2 Hb_002539_060 0.0040439483 - - -
3 Hb_003687_260 0.005010649 - - PREDICTED: inorganic phosphate transporter 1-4-like [Camelina sativa]
4 Hb_081212_010 0.0073085486 - - -
5 Hb_173479_010 0.0173152274 - - -
6 Hb_019429_010 0.0383593466 - - conserved hypothetical protein [Ricinus communis]
7 Hb_002192_060 0.0407584793 - - -
8 Hb_048635_010 0.0429441976 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
9 Hb_072376_010 0.0433923372 - - -
10 Hb_000963_100 0.0436721201 - - Protein SUA5, putative [Ricinus communis]
11 Hb_052135_040 0.0437337451 - - -
12 Hb_095589_010 0.0440016417 - - Ankyrin repeat family protein, putative [Theobroma cacao]
13 Hb_000473_130 0.0441263151 - - PREDICTED: uncharacterized protein LOC105778857 [Gossypium raimondii]
14 Hb_000603_060 0.0441361578 - - putative gag protein [Coffea canephora]
15 Hb_004785_110 0.0441771732 - - -
16 Hb_000266_090 0.0501615469 - - -
17 Hb_001740_020 0.0520890567 - - hypothetical protein JCGZ_23765 [Jatropha curcas]
18 Hb_007966_010 0.0553666998 - - carbohydrate binding protein, putative [Ricinus communis]
19 Hb_086063_030 0.0560826353 - - PREDICTED: pre-mRNA-processing-splicing factor 8-like [Camelina sativa]
20 Hb_011549_020 0.0639861101 - - -

Gene co-expression network

sample Hb_049719_010 Hb_049719_010 Hb_002539_060 Hb_002539_060 Hb_049719_010--Hb_002539_060 Hb_003687_260 Hb_003687_260 Hb_049719_010--Hb_003687_260 Hb_081212_010 Hb_081212_010 Hb_049719_010--Hb_081212_010 Hb_173479_010 Hb_173479_010 Hb_049719_010--Hb_173479_010 Hb_019429_010 Hb_019429_010 Hb_049719_010--Hb_019429_010 Hb_002192_060 Hb_002192_060 Hb_049719_010--Hb_002192_060 Hb_002539_060--Hb_003687_260 Hb_002539_060--Hb_081212_010 Hb_002539_060--Hb_173479_010 Hb_002539_060--Hb_019429_010 Hb_072376_010 Hb_072376_010 Hb_002539_060--Hb_072376_010 Hb_003687_260--Hb_173479_010 Hb_003687_260--Hb_081212_010 Hb_003687_260--Hb_019429_010 Hb_003687_260--Hb_072376_010 Hb_081212_010--Hb_173479_010 Hb_081212_010--Hb_002192_060 Hb_048635_010 Hb_048635_010 Hb_081212_010--Hb_048635_010 Hb_173479_010--Hb_019429_010 Hb_173479_010--Hb_072376_010 Hb_019429_010--Hb_072376_010 Hb_000963_100 Hb_000963_100 Hb_019429_010--Hb_000963_100 Hb_052135_040 Hb_052135_040 Hb_019429_010--Hb_052135_040 Hb_095589_010 Hb_095589_010 Hb_019429_010--Hb_095589_010 Hb_000473_130 Hb_000473_130 Hb_019429_010--Hb_000473_130 Hb_000603_060 Hb_000603_060 Hb_019429_010--Hb_000603_060 Hb_002192_060--Hb_048635_010 Hb_000742_050 Hb_000742_050 Hb_002192_060--Hb_000742_050 Hb_039385_010 Hb_039385_010 Hb_002192_060--Hb_039385_010 Hb_011903_030 Hb_011903_030 Hb_002192_060--Hb_011903_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.175231 0.127745 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis